Herbaspirillum seropedicae SmR1: Hsero_4496
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Entry
Hsero_4496 CDS
T01268
Symbol
xylH
Name
(GenBank) ABC-type D-xylose transport system, permease component protein
KO
K10544
D-xylose transport system permease protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_4496 (xylH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_4496 (xylH)
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
Hsero_4496 (xylH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ADJ65962
UniProt:
D8IWS5
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All DBs
Position
5143329..5144486
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AA seq
385 aa
AA seq
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MTSSTLASMADLKQVFRRYKIIALLIAIAIIWGFFSFMTDGGFVTPRNLSNLLRQMSVTG
ILACGMVLVIIAGEIDLSVGSLLGLLGGLAALLDVSHHLPLALNLVLALGFGLALGLLNG
YLTAYLGIPSFIVGLGGMLAFRGILLGITGGLTIAPVSDNMVYLGQGYLPPQMGVALGIA
LFVLAVALTWMSRVNRSRHGLPLAALWRDALKVVVIGAVLLAFVRTLNSYDGIPVPVLLL
LALLGLFSYVSTQTVFGRRIYSVGSNMEATRLSGVNVQAVKLWVFGIMGVMCALAGLVNT
ARLAAGSPSAGNMGELDAIAACFIGGTSMRGGSGTIYGALIGALVMASLDNGMSMLDVGT
YWQMIVKGSILVLAVWVDVSTRSGR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaagcaccctggccagcatggccgacctcaagcaggtattccgccgttacaag
atcattgcgctcttgatcgccatcgccatcatctggggcttcttcagcttcatgaccgat
ggcggcttcgtgacgccccgcaatctctccaacctgttgcgccagatgtcggtgaccggc
atcctggcctgtggcatggtgctggtcatcatcgccggtgaaatcgacctgtcggtgggt
tcgctgctgggcctgctgggtggcctcgccgcgctgctggacgtgagccaccacctgccg
ctggcgctgaacctggtgctggcgctgggcttcggcctggcgctgggcctgctcaatggc
tatctcaccgcctacctgggcattccctccttcatcgtcggcctgggcgggatgctggcc
ttccgcggcatcctgctgggcatcaccggcggcctgaccatcgccccggtgtcggacaac
atggtctacctcggccagggctacctgccgccgcagatgggcgtggcgctgggcattgca
ctgttcgtgctggcggtcgcgctgacctggatgagccgcgtgaaccgcagccgccatggc
ctgccgctggcggcgctctggcgcgatgcgctcaaggtggtcgtcatcggtgcggtgctg
ctggccttcgtgcgcacgctcaacagctatgacggcatccccgtgccggtgctgctgttg
ctggcgctgctgggcctgttcagctacgtgagcacgcagaccgtgtttggccgccgcatc
tattcggtgggcagcaacatggaagccacccgcctgtcgggcgtgaatgtgcaggcggtc
aagctgtgggtgttcggcatcatgggtgtgatgtgcgcgctggccggcctggtcaacacc
gcgcgcctggctgccggttcgccctcggcgggcaacatgggcgaactggatgcgatcgcg
gcctgcttcatcggcggcacctccatgcgcggcggctccggcaccatctatggcgcgctg
atcggcgcgctggtgatggccagtctcgacaacggcatgtccatgctggacgtaggcacc
tactggcagatgatcgtcaagggcagcatcctggtgctggcggtgtgggtcgatgtgagc
acccgttcgggccgttga
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