Herbaspirillum seropedicae SmR1: Hsero_4536
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Entry
Hsero_4536 CDS
T01268
Symbol
ompR
Name
(GenBank) two component transcription regulator protein
KO
K07774
two-component system, OmpR family, response regulator TctD
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hsero_4536 (ompR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hse02022
]
Hsero_4536 (ompR)
Two-component system [BR:
hse02022
]
OmpR family
TctE-TctD (tricarboxylic acid transport)
Hsero_4536 (ompR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
GlnR_1st
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
ADJ66002
UniProt:
D8IWW5
LinkDB
All DBs
Position
5196666..5197340
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AA seq
224 aa
AA seq
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MRILLVEDHIELSRWLAKAMRDAHLTVECAHNGADADSLLLTQDYALVILDLTLPRMDGM
EVLKRMRARGNRTPVLILTARGGLADRVSGLNMGADDYLAKPFELEELEARVKALLRRSQ
NNEAVTVSCGALSFDTVSRTFTYGGELLALTPREHAVLEALIVRHGHTVPKEKLFQQVFT
LEDNASMDAIEIYIHRLRKKLEHEGPGRVGITTLRGLGYLLQAT
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctgctggtcgaagaccatatcgaactttcccgctggctggccaaggccatg
cgcgacgcccacctgacagtggagtgcgcccacaacggcgctgacgccgacagcctgctg
ctcacgcaagactatgcgctggtgatcctggacctgaccctgccgcgcatggatggcatg
gaagtcttgaagcgcatgcgcgcgcgcggcaaccgcacgccggtgttgatcctcaccgcc
cggggcggcctggccgaccgcgtcagcggcctgaacatgggggccgatgactacctggcc
aaacccttcgagctggaagagctggaggcgcgcgtgaaggccttgctgcgccgctcgcag
aacaatgaagcggtcaccgtcagttgcggcgcactgagtttcgataccgtatcgcgcacc
ttcacctatggcggtgaactgctggcgctcacgccccgtgagcatgcggtgctggaagcg
ctgatcgtgcgccatggccatacggtccccaaggaaaagctgttccagcaggtctttacg
ctggaagacaacgccagcatggacgccatcgaaatctacatccatcgcctgcgcaagaag
ctggaacacgaaggccctggacgggtgggcatcaccaccctgcgcggcctgggctatctg
ctgcaggcgacgtga
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