Herbaspirillum seropedicae SmR1: Hsero_4572
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Entry
Hsero_4572 CDS
T01268
Name
(GenBank) LysR family transcription regulator protein
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hse03000
]
Hsero_4572
Transcription factors [BR:
hse03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Hsero_4572
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ADJ66038
UniProt:
D8IX01
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All DBs
Position
complement(5243190..5244122)
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AA seq
310 aa
AA seq
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MEIKWVEDFLSVVETLNFSRSAKLRNVTQPAFGRRIRSLETWLGAELFDRSSYPCTLTQA
GESFVPIAKEMLNQSMQARLVLRGQLAGAQSAVRLAMPHTLLLTVFPKLLSEIEKSIGAI
STTVMAGNVHDAVMALVERNCDLLLCYDHRQQGIALDTERYDVLSLGKEPLRPYVKTLPN
GLPKYVLPGAPNDPQPFLSYSPYSSLSRIVEKALHSSPRQVHLFRRFETDLAEGLKSMAV
EGHGIAWLPASAVAREIAEGKLTLAIAPTDSEALEQGLWCDEMDIRVYRRLDGANPDIDR
IWNYLKAEHG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaatgggtagaggacttcctctccgtggtcgagacgctcaacttcagccgc
tcggccaagctgcgcaatgtgacgcagccggccttcggacgccgcatccgttcgctggaa
acctggctgggcgcagagctgttcgaccgctcttcctatccctgtacgctgacccaggcc
ggcgaatccttcgtccccatcgccaaggaaatgctgaaccagtccatgcaggcgcggctg
gtgctgcgcggccagctggccggggcccaatcggcggtgcgcctggccatgccgcatacg
ctgctgctgacggtgtttcccaagctgctctccgagatcgagaaatccatcggcgccatc
tccactaccgtgatggccggcaatgtgcatgacgccgtcatggccctggtggagcgcaac
tgcgacctgctgctgtgctatgaccaccgccagcagggcatcgccctcgataccgagcgc
tatgacgtgctctcgctgggcaaggagcccttgcggccctacgtgaagaccttgcccaat
ggcctgcccaagtatgtgctgcccggcgcgcccaatgatccccagcctttcctgagctat
tcgccgtattcgtcgctctcgcgcatcgtcgagaaggccctgcattccagcccgcgccag
gtacatctgttccgccgcttcgagaccgacctggccgagggcctgaagagcatggctgtc
gaaggccatggcatcgcctggctgcccgccagcgccgtggcgcgcgagatcgccgaaggc
aagctgaccctggccatcgcccccaccgacagcgaagcgctggagcagggcctgtggtgc
gacgagatggacatccgcgtctatcgccgcctggatggcgccaatcccgacatcgaccgc
atctggaactatctcaaggccgaacacggctag
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