Herbaspirillum seropedicae SmR1: Hsero_4587
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Entry
Hsero_4587 CDS
T01268
Name
(GenBank) superfamily II helicase protein
Organism
hse
Herbaspirillum seropedicae SmR1
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADJ66053
UniProt:
D8IX16
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Position
complement(5261569..5264058)
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AA seq
829 aa
AA seq
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MAASLISPARMASSPTVSAFHPRLTLQTLTRGDGLLGMRAHGLFGPRGGMVTVAQIDWVY
GQGAQGWSTPAPTSPNGDQPDYTPAHIQRDHQAEAAALEDIRELGLLPLREDALQWRAHN
PLHDAGPLWTLVQEEFFGDFWADQAPRLQAQGWILRARPGFAHESVPVTAWRFIVSSQTG
EVINREVAAPLTPRAFSSEVFDGLDPSGRWLLAIGIEVEGQSMDVAPMVADLLRRDPRWG
DAQQVERMDPHAVISLRAPGGRRIDAMAGPLKAVVLALLDLLVDLGRKDGPLRLTPWDAH
RIDGLQAALQGLEGATPWHISGADGLLALARRLRAAGSVAPVPQPDGLGLTLRDYQRYGV
AWMQYLRTHGLAGILADDMGLGKTAQVLAHVLIEKQAGRLDLPVLVVAPTSLLFNWQQEA
RRITPDLRVLLLHGQERAQHFSALASGQVDLVLTSYPLLWRDLDQLLPQRWHMLVLDEAQ
TVKNAASRSAAAARRLQARHRLCMTGTPLENHLGELWSQFHFLMPGFLGDARSFARLWRK
PIEEQGQTVRARLLAQRVRPFILRRRKQDVLQELPPRSEIIERLPLQGRQRELYESVRMA
ADKQVRRALERRGLGGSQVTVMDALLKLRQVCCDPYLLKQGRMPKGLERAKIDWLCDTLP
ALVAEGRRILVFSQFTGMLKLIAAQLEPLQLPYLMLTGETEPAARADVIAGFQQEQTPLM
LVSLKAGGVGLNLTAADTVVLVDPWWNPAVEEQAIARAHRLGQQRQVFVYKLVIEGSIEE
RLLELQARKSALAEGMLGRDDATTVKFGEEELQALLAPLGAGIAEKILA
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttcgctgatatctcccgcacgcatggccagctcccccaccgtttccgctttc
catccccgcctgacgctgcagaccctcacccgtggcgacggcctgctgggcatgcgcgcg
catggcctgttcggtccgcgcggcggcatggtcacggtggcgcagatcgactgggtctat
ggccagggcgcacagggctggagcacgcccgcgcccaccagtcccaacggcgaccaaccc
gactacacccccgcccacatccagcgcgaccaccaggccgaagccgccgcgctggaagac
atccgcgagctgggcctgctgccgctgcgcgaggacgccctgcaatggcgcgcccacaat
cccctgcatgacgccggtcccttgtggacgctggtgcaggaagaattcttcggcgacttc
tgggccgatcaggctccgcgcctgcaggcgcagggctggatcctgcgcgcccgtccgggc
tttgcccatgagagcgtaccggtgacggcctggcgtttcatcgtcagcagccagaccggc
gaagtgatcaaccgcgaggtggccgcgcccctcacgccacgcgctttttccagcgaagtc
ttcgatggcctcgacccgagcggacgctggctgcttgccatcggcatcgaggtcgagggc
cagtccatggatgtggcgcccatggtggccgatctcttgcggcgcgatccgcgctggggc
gatgcacagcaggtcgagcgcatggacccgcatgcggtgatctccctgcgcgctcccggt
ggccgccgcatcgacgccatggccggaccgctcaaggcggtggtattggccttgctggac
ctgctggtggacctgggccgcaaggacggcccattgcgcctgacgccctgggacgcgcat
cgcatcgacggcctgcaggccgccctgcaagggctggagggcgccacaccctggcacatc
agcggcgcggacggcctgctggcgctggcgcgccgcctgcgcgctgccggcagcgtcgcg
ccagtgccccagcccgatggcctgggactgacattgcgtgactatcagcgctatggcgtg
gcctggatgcaatacctgcgcacccatggactggccggcatcctggccgacgacatgggc
ctgggcaagaccgcccaggtgctggcccatgtgctcatcgaaaaacaggccggccgtctg
gacctgccggtgctggtggttgcgccgacttcgctgctgttcaactggcagcaggaggcg
cgccgcatcacccctgatctgcgcgtgctgctgctgcatggccaggagcgcgcccagcac
ttcagcgccctcgccagcggccaggtcgatctggtgctgaccagctatccgctgctctgg
cgcgacctcgaccagttgctgccgcagcgctggcacatgctggtgctggacgaagcccag
accgtcaagaacgccgcctcgcgcagcgccgccgccgcccgccgcttgcaggcgcgccat
cggctgtgcatgaccggcacgccgctggaaaatcacctgggcgagctgtggagccagttc
catttcctcatgcccggttttctgggcgatgcgcgcagctttgcgcgcctgtggcgcaag
cccatcgaagagcagggccagaccgtgcgtgcgcgcctgctggcgcagcgggtgcggccc
ttcatcctgcgccggagaaagcaggatgtcttgcaggagttgccgccgcgcagcgagatc
atcgaacgcctgcccctgcagggccgccagcgcgaactctacgagagtgtgcgcatggcc
gccgacaagcaggtgcggcgcgcgctggaacggcgcggcctgggcggctcccaggtcacc
gtgatggatgccttgctcaagctgcgccaggtctgctgcgatccctacctgttgaagcag
ggccgcatgcccaaggggttggagcgcgccaagatcgactggctgtgcgacaccctgccc
gcgctggtggccgaagggcggcgcatcctggtgttctcgcaattcaccggcatgctcaag
ttgatcgccgcgcagctggagccattgcagttgccctacctgatgctcaccggcgagacc
gagcccgccgcccgcgccgatgtgatcgccggctttcagcaggagcagacgccgctgatg
ctggtgagcctgaaggccggcggcgtcggcctgaacctcactgccgccgataccgtggtg
ctggtcgatccctggtggaacccggccgtggaagagcaggccatcgcccgcgcccatcgg
ctgggccagcagcgccaggtattcgtctacaagctggtcatcgaaggcagcatcgaagaa
cgtctgctggaactgcaggcccgcaagtcggccctggccgaaggcatgctggggcgcgac
gatgccaccaccgtcaagtttggcgaagaagaattacaggcgttgctggccccgctgggc
gcaggcattgccgagaagatcctggcctga
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