Herbaspirillum seropedicae SmR1: Hsero_4665
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Entry
Hsero_4665 CDS
T01268
Symbol
mrdA
Name
(GenBank) cell division protein FtsI (peptidoglycan synthetase) protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00550
Peptidoglycan biosynthesis
hse01100
Metabolic pathways
hse01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Hsero_4665 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Hsero_4665 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hse01011
]
Hsero_4665 (mrdA)
Enzymes [BR:
hse01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Hsero_4665 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
hse01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Hsero_4665 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ADJ66131
UniProt:
D8IY09
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Position
5354219..5356189
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AA seq
656 aa
AA seq
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MTEFKNTAHELRLFRIRLLAVSVLVLVCFSLLLARFLWLQVVRHDAYAAQAEENRISVVP
IVPNRGLILDRNGVVLARNYSAYTLEITPSKIRTNIDDLIDELGTLVEIQPRDRRRFRRL
QEESKNFESVPIRTRLTDEEVAKFTAQRYRFPGVEVQARLFRQYPYGKTAAHVIGYIGRI
SQRDAERIADSDDEANYNGTDYIGKEGLEKSYESQLHGTTGYEEVEISASGRAVRSLSRT
PATPGKNLILSIDIELQKVVEEAFGDQKGALVAINPATGDILAYVSQPSYDPNLFVEGID
QQSWDELNKSPDRPLLNRPLSGLYSPGSTYKPFMALAALELGKRRPQDAIRDPGYFILGN
HRFRDDKEGGHGVVDMYRSVVVSCDTYYYMLANDMGVNAIHDFMKPFGFGQITGIDLEHE
KRGILPSTEWKRTAFRKPEQKRWIAGDTVSLGIGQGYNSFTPLQLAQATAILANNGVVMK
PHLVKIVEDGVTHERTETVPKESYRIPMKQENIDFIKRAMVGVVKEGTGAAAFRGAPYES
GGKTGTAQVVNIAKNQKYDSKKLSRIYHDNGLYIGFAPADAPRIAIAAVVENGGWGAGVA
APLVRKAMDYFMLGKRPNEPIKSIAPAEAVTADTPVEGPTSEDNGATPTVQPDVQE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaattcaagaataccgcgcatgagctgaggctgttccgcatacgcctgctggcg
gtgagcgtgctggtgctggtctgcttcagcctgctgctggcgcgctttctgtggctgcag
gtggtgcgccacgacgcctacgccgcccaggccgaggaaaaccgcatctcggtggtgccc
atcgtgcccaaccggggcctgatcctggaccgcaacggcgtggtgctggcgcgcaattac
tcggcctacacgctggaaatcaccccttccaagatccgcaccaacatcgatgacctcatc
gatgagctgggcacgctggtggaaatccagccgcgcgaccgccgccgcttccgccgcctg
caggaagaatccaagaacttcgaaagcgtccccatccgcacccgcctgaccgatgaggaa
gtggccaagttcaccgcccagcgctatcgcttcccgggcgtggaagtgcaggcccgcctg
ttccgccagtatccctatggcaagacggcggcgcacgtgatcggctacatcggccgcatc
agccagcgcgatgccgaacgcattgccgattccgacgacgaggccaactacaacggtacc
gactacatcggcaaggaaggcctggaaaagagctacgaaagccagctgcacggcaccacc
ggctacgaggaagtggaaatctcggccagcgggcgcgcggtgcgttcgctctcgcgcacg
ccggccacgcccggcaagaacctgatcctgtccatcgacatcgagctgcagaaggtggtg
gaagaagccttcggcgaccagaagggcgcgctggtcgcgatcaacccggccaccggcgac
atcctggcctatgtctcgcagccctcctatgaccccaacctgttcgtcgaaggcatcgac
cagcagagctgggatgagttgaacaagtcccccgaccggccgctgctgaaccgccccctg
tcgggcctgtattcgcccggttcgacctataagcccttcatggcgctggccgcgctggag
ctgggcaagcgccgcccgcaagacgccatccgcgaccccggctacttcatcctgggcaac
caccgtttccgcgatgacaaggaaggtggccacggggtggtggacatgtaccgctcggtg
gtggtctcctgcgacacctactactacatgctggccaatgacatgggggtcaacgccatc
catgacttcatgaagccgttcggcttcggccagatcaccggcatcgacctggagcacgag
aagcgcggcatcctgccctccaccgagtggaagcgcaccgccttccgcaaacccgagcag
aagcgctggatcgccggcgacaccgtctcgctgggcatcggccagggttacaacagcttt
acgccgctgcaactggcgcaggccacggccatcctggccaacaacggcgtggtgatgaag
ccgcacctggtcaagatcgtcgaggatggcgtgacccacgagcgcaccgagaccgtgccc
aaggaaagctaccgcatcccgatgaagcaggaaaacatcgacttcatcaagcgcgccatg
gtgggcgtggtcaaggaaggcacgggcgccgccgccttccggggtgcgccctatgaatcg
ggcggcaagaccggtacggcgcaggtggtcaacatcgccaagaaccagaagtacgactcc
aagaagctctcgcgcatctaccacgacaacggcctgtatatcggctttgccccggccgat
gcgccgcgcattgccattgcggcggtggtcgagaacggtggctggggcgctggcgtagcc
gcgccgctggtgcgcaaggccatggactacttcatgctgggcaagcgtcccaacgaaccg
atcaagtcgatcgcgcccgccgaggccgtgaccgccgatacgccggtcgaaggcccgacc
tccgaggacaacggcgccacgccgacggtccagccggatgtgcaggaatga
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