Herbaspirillum seropedicae SmR1: Hsero_4707
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Entry
Hsero_4707 CDS
T01268
Name
(GenBank) ABC-type transport system, duplicated ATPase domains component protein
KO
K06020
energy-dependent translational throttle protein EttA
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hse03016
]
Hsero_4707
Transfer RNA biogenesis [BR:
hse03016
]
Prokaryotic type
tRNA transport factors
tRNA export factors
Hsero_4707
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
MMR_HSR1
AAA_22
AAA_28
AAA_33
RsgA_GTPase
AAA_23
Dynamin_N
nSTAND3
APC_basic
Motif
Other DBs
NCBI-ProteinID:
ADJ66173
UniProt:
D8IY51
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Position
complement(5399388..5401055)
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AA seq
555 aa
AA seq
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MAQYVFTMNRVGKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTLLKIMAGIDKEIE
GEAIPMPNLNIGYLPQEPQLDAEKTVRQEVESALGEVFEAQAKLDAVYAAYAEEDADFDA
LATEQARLEAIIAAADGNSLNQQLEMAADALRLPPWDAKIGVLSGGEKRRVALCKLLLSK
PDMLLLDEPTNHLDAESVDWLEQFLQRFPGTVVAITHDRYFLDNAAEWILELDRGHGIPW
KGNYSSWLEQKEARLKQEEASESARQKTIAKELEWVRQNPKGRQAKSKARLARFNELSEY
EYQKRNETQEIFIPVAERLGNEVIEFKNVSKGYGDRLLIDDLNFKIPAGAIVGIIGPNGA
GKSTLFRMLAGRETPDSGEVVLGPTVKVSLVDQSREDLGNKKTVFEDVSGGADILTVGRF
EMPSRAYLGRFNFKGGDQQKIVGNLSGGERGRLHLAKTLLQGGNVLLLDEPSNDLDVETL
RALEDALLEFAGTVLVISHDRWFLDRIATHIIAFEGDSQVTFFDGNYQEYEADKKKRLGE
EAAKPKRIRYKPVTR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcccaatacgtctttaccatgaaccgcgtcggcaagatcgtgccgccgaagcggcag
atcctcaaggacatctcgctgtccttcttccccggcgccaagatcggcgtgctcggcctg
aacggctcgggcaagtccaccctgctcaagatcatggccggcatcgacaaggaaatcgag
ggtgaagccatcccgatgcccaacctcaacatcggttacctgccgcaggaaccccagctc
gacgccgagaagaccgtgcgccaggaagtcgaaagcgccctgggcgaagtcttcgaagcc
caggccaagctcgatgcggtctatgccgcctatgccgaggaagacgccgacttcgacgcc
ctggccaccgaacaggcgcgcctggaagccatcatcgccgccgctgacggcaacagcctc
aaccagcagctggaaatggccgccgacgcactgcgcctgccgccctgggacgccaagatc
ggcgtgctctccggcggcgaaaagcgccgcgtggcgctgtgcaagctgctgctctccaag
cccgacatgctgctgctggacgaaccgaccaaccacctggacgccgaatcggtggactgg
ctggagcagttcctgcaacgcttccccggcaccgtggtggccatcacccacgatcgctac
ttcctcgacaacgccgccgaatggatcctggaactggaccgtggccacggcatcccctgg
aagggcaactacagctcctggctggaacagaaggaagcgcgcctgaagcaggaagaagcc
agcgaatcggcgcgccagaagaccatcgccaaggaactggagtgggtgcggcagaacccc
aagggccgccaggccaagagcaaggcgcgtctggcgcgcttcaacgagctgtccgaatac
gaataccagaagcgcaacgagacccaggaaatcttcattcccgtggccgagcgcctgggc
aatgaagtcatcgaattcaagaacgtcagcaagggttatggcgaccgtctgctgatcgac
gatctgaacttcaagattccggccggcgccatcgtcggcatcatcggccccaacggcgcc
ggtaagtcgaccctgttccgcatgctggccggccgcgaaaccccggacagcggcgaagtc
gtgctcggccccaccgtcaaggtatcgctggtggaccagtcgcgcgaagacctgggcaac
aagaagacggtcttcgaagacgtctccggcggcgccgacatcctcaccgtgggccgcttc
gaaatgccttcgcgcgcctacctgggccgcttcaacttcaagggcggcgaccagcagaag
atcgtcggcaacctctccggtggtgagcgcggccgtctgcacctggccaagaccctgctg
cagggcggcaacgtcctgctgctggacgaaccctccaacgacctcgacgtggaaaccctg
cgcgccctggaagatgcgttgctggaattcgccggcaccgtgctggtgatctcccacgat
cgctggttcctggaccgtatcgccacccacatcatcgccttcgaaggcgattcgcaggtc
accttcttcgacggcaactatcaggaatacgaagccgacaagaagaagcgcctgggcgaa
gaagccgccaagcccaagcgtatccgttacaagccggttacgcgctaa
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