Herbaspirillum seropedicae SmR1: Hsero_4742
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Entry
Hsero_4742 CDS
T01268
Name
(GenBank) amino acid deacylase protein
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00300
Lysine biosynthesis
hse01100
Metabolic pathways
hse01120
Microbial metabolism in diverse environments
hse01230
Biosynthesis of amino acids
Module
hse_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Hsero_4742
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hse01002
]
Hsero_4742
Enzymes [BR:
hse01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Hsero_4742
Peptidases and inhibitors [BR:
hse01002
]
Metallo peptidases
Family M20
Hsero_4742
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
ADJ66203
UniProt:
D8IY81
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All DBs
Position
complement(5438237..5439481)
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AA seq
414 aa
AA seq
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MSKEQLSQRLCAWIDQHFDEEVGVLQQLIRIPTDTPPGNNAPHADAVAELVAGWGWAAEK
HVVPAQQVADYGMQSITNLIVRRPYGDGGPTLALNAHGDVVPPGEGWTHDPYGGEIADGR
IYGRAAAVSKSDFASYLFATRALEAVGASLRGGVELHFTYDEEFGGLLGPGWLLEQKLTR
PDYVLAAGFSYNVVTAHNACLQFEITVHGRATHGSMPETGHDALQAATAILNAIYGALPG
LKEIRSAIPGITHPTMIVGRIDGGTNTNVVPGKVVLKMDRRMIPEEDPSQVEAGVRKLIE
DAVAGLPGIRVEIRRLLLARALRPLPGHEKLVESLLRNAREVMGETLTTNGSALYTDARL
YGEQGIPVVLFGAGPRTLMESNAKQADENLALDDLRKATKVVALMLLDFLGPQG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagagcagttgtcgcagcgcctgtgcgcctggatcgatcagcatttcgacgaa
gaggtcggggtgttgcagcagctgatccgcatccccaccgataccccgccgggcaacaac
gccccgcacgccgatgcggtggccgaactggtcgccggctggggctgggcggcggaaaag
catgtggtgccggcccagcaggtggccgactatggcatgcagagcattaccaacctgatc
gtgcgacgtccctatggcgatggcggtccgaccctggcgctcaatgcgcatggcgacgtg
gtgccgccgggcgaaggctggacccatgatccctatggcggcgagatcgccgacggtcgc
atctatggccgcgcagcggccgtctccaagagcgacttcgccagctacctgttcgccacc
cgcgcactggaagcggtgggcgcatcgctgcgcggcggcgtcgagctgcatttcacctat
gacgaggaattcggtggcctgctcggccccggctggctgctggagcagaagctgacccgc
cccgactacgtgctggcggccggcttcagctacaacgtcgtgactgcccacaatgcctgc
ctgcagttcgagatcaccgtgcatggccgcgccacccatggctccatgcccgagaccggc
cacgatgcgctgcaggccgccacggccatcctcaacgccatctatggcgcgctgccgggt
ctcaaggagatccgctcggccatccccggcatcacccatccgaccatgatcgtgggccgc
atcgatggcggcaccaataccaatgtggtgccgggcaaggtggtgctgaagatggaccgc
cgcatgattcccgaggaagacccgagccaggtcgaggctggcgtgcgcaagctgatcgag
gatgcggtggcgggcctgccgggcatccgcgtggagatccgccgcctgttgctggcgcgc
gcgctgcgcccgctgccgggccacgagaagctggtcgagagcctcttgcgcaatgcccgc
gaggtcatgggcgagaccctcaccaccaatggctcggcgctctataccgacgcccggttg
tatggcgagcagggcattccggtggtgctcttcggcgccggtccgcgcaccttgatggaa
tccaacgccaagcaggccgacgagaacctggcgctggacgacctgcgcaaggcgaccaag
gtggtggcactgatgctgctggacttcctcggcccgcaaggctga
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