Herbaspirillum seropedicae SmR1: Hsero_4797
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Entry
Hsero_4797 CDS
T01268
Symbol
betA
Name
(GenBank) choline dehydrogenase protein
Organism
hse
Herbaspirillum seropedicae SmR1
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
DAO
Lycopene_cycl
NAD_binding_8
FAD_binding_2
Pyr_redox_2
HI0933_like
Pyr_redox_3
Thi4
Pyr_redox
GIDA
FAD_binding_3
TrkA_N
ApbA
GDI
Motif
Other DBs
NCBI-ProteinID:
ADJ66258
UniProt:
D8IZ54
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Position
complement(5502075..5503694)
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AA seq
539 aa
AA seq
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MQSAGQYDYIIIGAGTAGCVMANRLSRKTGKKVLLIEAGAKDDYIWIHIPVGYLYCINNP
RTDWMFRTEADAGLNGRSLIYPRGKVLGGCSSINGMIYMRGQARDYDHWADVTGDDSWRW
QNVLPLFKKSEDYHLGAGQFHGAGGEWRVEKQRLRWDILDAFRDAAAENGIPKVEDFNCG
DNEGCGYFDVNQKRGVRWNASKAFLRPAMKDGNLTIMTGSHVSRLRMEQGEQGPVCTGVE
FTGGGSAWFAEAKETILCAGAIGSPHILQMSGIADPALLQQHQIPVVHALPGVGENLQDH
LQMRMVFKVNGAKTLNAMASTLVGKMQIGLQYLFTQSGPMSMAPSQLGAFAKSDAQQASA
NLQYHVQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRLASGDHALAPRITTNYLSTE
EDLKVAANALRLTRRIAASPALSRYRPEEYKPGAHYETEEDLYRAAGEVGTTIFHPVGTC
RMGRSDDAMAVVDAQGRVRGVGGLSVADASVMPSITSGNTNSPTVMIAEKVASSLLSRA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcggcagggcaatacgactacatcatcattggcgccggcaccgccggttgcgtc
atggccaaccggctctcgcgcaagaccggcaagaaggtgctgctcatcgaggcgggcgcc
aaggacgactacatctggatccatatcccggtgggctatctctactgcatcaacaatccg
cgcaccgactggatgttccgcaccgaagccgatgccggtctgaacgggcgcagcttgatc
tacccgcgcggcaaggtgctggggggctgttcgtccatcaacggcatgatctacatgcgc
ggccaggcgcgggattacgaccactgggccgacgtgacgggtgacgacagctggcgctgg
cagaacgtgctgccgctgttcaagaagagcgaggattaccatctcggcgccggccagttc
cacggtgcgggcggcgaatggcgcgtggagaaacagcgcctgcgctgggacatcctcgat
gccttccgcgatgcggccgccgagaatggcatccccaaggtcgaggacttcaactgcggc
gataacgagggctgtggctacttcgacgtcaaccagaagcgcggcgtgcgctggaacgcg
tccaaggccttcctgcggcctgccatgaaggatggcaacctcaccatcatgaccggctcc
cacgtgagccgcttgcgcatggagcagggcgagcaggggccggtctgcaccggcgtcgaa
ttcaccgggggcggcagcgcctggtttgccgaagccaaggaaaccatcctgtgtgcgggg
gccatcggttcgccgcacatcctgcagatgtcgggcatcgccgatccggcgctgctgcag
cagcaccagatcccggtggtgcatgcgctgccgggcgtgggcgagaacctgcaggaccat
ctgcagatgcgcatggtcttcaaggtcaacggcgccaagaccctcaacgccatggcctcg
accctggtcggcaagatgcagatagggctgcaatacctgttcacgcaaagcggtccgatg
tcgatggcgccctcgcagctgggggccttcgccaagtccgatgcgcagcaggccagcgcc
aacctgcaataccatgtgcagccgctgtcgctggaaaagttcggcgatccgctgcatgcc
ttccctgccttcaccgccagcgtgtgcaacctgcgtccgacctcgcgcggccatgtgcgc
ctggcctcgggggatcacgcgctggcgcccaggatcaccaccaactacctctccaccgaa
gaggacctgaaggtcgccgccaatgcgctgcgcctgacccgccgcatcgccgcttcgccg
gcgctgtcgcgctaccgtccggaggaatacaagcccggcgcgcactatgagacagaagag
gatctgtatcgcgctgccggtgaggtgggcaccaccatcttccatccggtaggcacctgc
cgcatgggccgcagcgatgatgcgatggccgtggtcgatgcccagggacgcgtgcgcggg
gtaggtggcctcagcgtagccgatgcctcggtgatgccctccatcacctccggcaacacc
aattcgccgaccgtcatgattgccgagaaagtcgcttccagcctgctttcccgggcatag
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