Haemophilus seminalis: L3077_00940
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Entry
L3077_00940 CDS
T08114
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hsem
Haemophilus seminalis
Pathway
hsem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L3077_00940 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsem03400
]
L3077_00940 (recC)
Enzymes [BR:
hsem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L3077_00940 (recC)
DNA repair and recombination proteins [BR:
hsem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L3077_00940 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UJZ90090
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Position
181064..184435
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AA seq
1123 aa
AA seq
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MFIVYYSNQLEKQKEILSSLFKSLPPEDPFQQDIILVQSPGMAQWLQIELAKETGISANL
KFPMPASFIWQLYAQNLPATALENPFDKDSMTWRLMRLIPTFLKKESFSPLRNYLASSPH
SEQYKLYQLSSKIADLFDQYLVYRPEWIFAWEKGEDEQITVQIQKQQPNLNDTLFEQIQS
NTKWQGELWRALVVDVKSDVGDATHRAALHNQFLALLADKKAPKKLPSRIFIFGIPALPT
AYLNILQAMSSEVDIHLFFNNPCQEYWGDISDLRLDYLRSRKRYQFNKQDKNQPLFSEDQ
LSQLENAQFDVTYQKENLQVGNPLLAAWGKMGRDFLYTLVRDEEHIPTYPVNAYQEIKSN
SLLGQLQSQILHLENKPLNIAKNDRTLTLHSCHSAMREVEILHDYLLDLFNQDPNLTPKD
VVVMVADINQYTPYIQAVFGQKNGDAPQIPFSLSDNKLSESDVLVSSYLTLLRLKESNFS
AEDVLALLDIPAMRERFNISLADLPLVREWVADSGIRFGLQKNQDGINFNSWQAGLERMM
LGYAMREEHGIWQDSLGLNSSYGLKGELAGNLSHFFTALSALHETLQQAHSIEKWQEILT
ALLSDFFVQNEDTSDTIFYIQEKINELAEHLKTLHFTEELQADVIADVITMKLEDAPNSL
KFLAGKVNFCTLLPMRSVPFKVVCLLGMNDADYPRTQTPNSFDLMQYHHQKGDRVRRDDD
RYLFLEALLAARDYCYISYVGRSITDNQPKEPSVLVSQLVDYINQGQSENTLTVIEHPMT
AFSPDNFKYNENFTRSFATKWLPIAQFNATSSNSEFAVTMTKNSEKIEEIELERLVSFVE
NPVKFFFEKQLGVYFRDEDDRIADSENFTLSGLDNYALNNDLIYLDEQNFADYFRQAEVK
GVLPRAEFGKVYAENIRDNVLEFKKKIADLGEAKHASIDFNISVDWRNENQEIRLFGYME
PLFGDDSQVIQWHFAKYKDRYCIRPWIYYLIQCVTQENAIPPKLITQDQVIELSPIEREA
ALAQLKIYVKDYLQSQIEIQLVPTIRNINDFIVDDESAVDFDNISTKLQELGEGSYGAQA
DPYWSRILAQISRFEQTENIEKLLKQTKDWFGLLFEQKKTRKA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
gtgttcattgtttactactctaatcaactcgaaaaacaaaaagaaattctttcttcctta
ttcaaatcgttacctccagaagatccttttcagcaagatattatcttggtgcaaagcccg
ggtatggcgcaatggctgcaaattgaattagcgaaagaaacaggcatttcagcgaacctc
aaatttcctatgccagcaagttttatttggcaactttatgctcaaaacttacccgcaacg
gcactggaaaatccttttgataaagattcaatgacatggcgattaatgcgattaatcccg
acttttctcaagaaagaaagtttttcacctttacgcaattatttagcatcatcgcctcat
tctgaacaatacaaactttatcaactcagcagcaaaattgccgatttatttgaccaatat
ttagtttatcgaccagaatggatttttgcttgggaaaaaggcgaagatgaacaaatcact
gttcaaatacaaaaacagcaacctaacctaaacgatactttgtttgagcaaattcaaagc
aatacaaaatggcaaggtgagttatggcgtgcattggtcgtcgatgttaaatcagatgtt
ggggatgccacacatcgagcggctttgcataatcagttcttagccttgcttgccgataag
aaagcaccgaaaaaattaccttcacgcatatttatttttggtattccagcacttccaact
gcttatctcaatattttgcaagcgatgtcatcagaagtggatattcatttattttttaat
aatccatgccaagagtattggggagatattagcgatttacgccttgattatttgcgttct
cgcaagcgttatcaattcaataaacaagataaaaatcaaccgctgttttccgaggatcaa
ctttctcaactagaaaacgctcagtttgatgtcacttatcaaaaagaaaaccttcaagta
ggcaatccgttactggctgcttggggaaaaatggggcgagattttctttacaccttggtg
cgagatgaagaacatattccaacttatcccgtcaatgcttatcaagaaattaaatcgaac
agtttgcttgggcaattgcagtctcaaattctgcatttagaaaataaaccgctaaatatc
gcaaaaaatgaccgtactttaaccctacattcttgccacagtgctatgcgtgaagtggaa
atattgcacgattatttattagatttatttaatcaagatcctaaccttacgccaaaagat
gtggttgttatggtggcagatataaaccaatatacaccttatattcaggcagttttcggg
caaaaaaatggggatgcgccacaaattccattttcactttcggataataaactttcagaa
agtgatgtgttggtatcaagttacttaactttattgcgcttaaaagaaagcaattttagt
gcagaggacgtcttagcgttgctggatattcctgcgatgcgagaacgatttaatatttct
cttgctgatttgccattagtgcgagaatgggtggcggattcagggattcgtttcggtttg
caaaaaaatcaagatggtatcaatttcaattcttggcaggctggattagaacgaatgatg
ttaggttatgcgatgcgtgaagaacacggtatttggcaagatagcctagggttaaacagc
agctatggcttaaagggtgaacttgctggaaatttatctcactttttcaccgcactttca
gcgttgcatgaaacgctgcaacaagcacattccatcgaaaaatggcaagaaattttaacc
gcgcttttatcagatttcttcgtgcaaaatgaagacacaagcgacacgattttctatatt
caagagaaaattaatgaattagctgagcatctaaaaacgctccattttactgaagaattg
caagcagacgtgattgccgatgtcatcacaatgaaattggaagatgcgccaaatagcctc
aaattccttgcaggaaaagtaaacttctgcaccttattaccaatgcgttcagtgccattc
aaggtagtttgtttacttggaatgaatgatgcggattaccctagaacacaaacaccaaac
agttttgatttaatgcaatatcaccatcaaaaaggcgaccgtgttcgccgtgatgatgat
cgctatttgttcttagaagccttattggcagcacgtgattattgctatatcagctatgtt
ggccgttccattacagataatcaaccgaaagaaccttctgtattggtaagtcaactcgtg
gattatattaatcaaggtcaaagcgaaaatacccttacggtgattgagcatccgatgaca
gcatttagcccagataatttcaaatataacgagaatttcacccgctcttttgcgacaaaa
tggttgccaatagcgcaatttaacgcgacatctagcaattcagaatttgccgtcactatg
acaaaaaactcagaaaaaatcgaagaaattgaactggagcgtttagtcagctttgttgaa
aacccagtgaaatttttctttgaaaaacaactcggtgtctatttccgcgatgaagatgat
cgtattgccgacagtgaaaacttcaccttaagtggattagataattacgcgctcaataat
gacttaatctatcttgatgaacaaaattttgctgattattttagacaagcagaagttaaa
ggcgtattacctcgagccgaatttggaaaagtttatgctgaaaatattcgagacaatgtt
cttgaatttaaaaagaaaatagcagatcttggcgaagccaaacatgcttctattgatttc
aatatttccgtagattggcgaaatgaaaatcaagaaattcgtctatttggttatatggag
cctttatttggcgatgattcacaggtaattcagtggcattttgcgaaatacaaagatcgc
tattgtatccgtccttggatttattatttgattcaatgtgtcacacaagaaaatgcgata
ccaccaaaattaattacgcaagatcaagttatcgaattatcgcctattgagcgtgaagcc
gctctcgctcaattaaaaatttacgtaaaagattatttacaaagccaaatagaaattcaa
ttggtgccaacgataagaaatattaatgattttattgtggacgatgaaagtgcggtagat
tttgacaatatttctacaaaacttcaggaactgggcgaaggcagctacggtgctcaagca
gatccatattggtcacgcatattggcgcagatctcaagatttgaacaaactgaaaatatt
gaaaaattattaaaacaaacaaaagattggtttggcttattattcgaacaaaagaagaca
agaaaggcataa
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