Haemophilus seminalis: L3077_01055
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Entry
L3077_01055 CDS
T08114
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
hsem
Haemophilus seminalis
Pathway
hsem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L3077_01055 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsem03019
]
L3077_01055 (rhlB)
Enzymes [BR:
hsem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L3077_01055 (rhlB)
Messenger RNA biogenesis [BR:
hsem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L3077_01055 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
UJZ90113
LinkDB
All DBs
Position
205950..207197
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AA seq
415 aa
AA seq
DB search
MQQDYLSQQRFSDLPLHPIVRDALAKKGFDFCTPIQALSLPISLNGRDVAGQAQTGTGKT
MAFLTSTFHHLLTHQDSNLEYRHPRALILAPTRELAVQISNDAEFLAKASGLKTALAYGG
DGYDKQLQAIERGVDILIGTTGRVIDYVKQGVISLDEIQVVVLDEADRMFDLGFIRDIRY
LLRKCPAPQSRLTMLFSATLSYKVRELAFEDMNDPEYIEIEPEQKTGHRIKEELFYPSNQ
DKMALLLTLMEDEWPERCIVFANTKHRCEEIWGYLAADGHRVGLLTGDVAQKKRLSLLKQ
FTDGDLDILVATDVAARGLHISDVTHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFAC
EEYAMNLPAIEEYIGHSIPVSQYETEALLELPKPYRLKRAVPSQGHTRHRSYHTK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagattatttaagccaacagcgattctccgatcttcctctacatccaattgta
cgagatgctttggcaaaaaaaggctttgatttttgtaccccaattcaggctttatccttg
cctatcagtttaaatggacgagatgttgcaggacaagctcaaactggtacaggcaagaca
atggcttttttaacgtctacttttcaccatcttttaactcaccaagattctaatcttgaa
tatcgtcacccaagagctttgattttagcacctacacgagaattagcggtgcagattagt
aatgacgcagaatttcttgcaaaagctagtggattaaagaccgcacttgcctatggtggc
gatggttatgataaacaactacaagcgattgagcgtggcgtcgatattttgattggtacg
actgggcgagtcattgattatgtaaaacaaggcgtaattagtttagatgaaattcaagtt
gtcgtgctagatgaagcggatcgaatgttcgatcttgggtttatccgtgatattcgttat
ttattacgtaaatgccccgctccgcaatctcgtttaacgatgttattttcagcgacactt
tcttataaagtgcgtgaattagcatttgaagatatgaatgaccctgaatatattgaaatt
gaaccggaacaaaaaacagggcaccgaatcaaagaagaacttttttatccatctaatcag
gataaaatggcacttctcttaaccttaatggaagatgagtggcctgagcgttgtattgtg
tttgcgaatactaaacatcgttgtgaagaaatttggggttatttggcggctgatgggcat
cgtgtcggcttactgactggcgatgtagcacagaaaaaacgtttatcgttattaaaacaa
tttactgatggtgatttggatattttagtggcaacagatgtggctgctcgtggcttgcat
atttctgatgtgacgcatgttttcaattatgatttacctgatgatagagaagattacgtt
caccgaattggtcgtactggacgagctggggaaagtggcgtttcgattagttttgcttgc
gaagaatatgcgatgaatttacccgcaattgaagaatatataggccattctatcccagtg
agccaatatgaaacagaagccttacttgaactgccgaaaccatatcggttaaaacgtgca
gtaccatcgcaagggcatacaagacatcgttcttatcacacaaaatag
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