Haemophilus seminalis: L3077_01255
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Entry
L3077_01255 CDS
T08114
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hsem
Haemophilus seminalis
Pathway
hsem00540
Lipopolysaccharide biosynthesis
hsem01100
Metabolic pathways
hsem01250
Biosynthesis of nucleotide sugars
Module
hsem_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hsem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
L3077_01255 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hsem01005
]
L3077_01255 (rfaD)
Enzymes [BR:
hsem01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
L3077_01255 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
hsem01005
]
Core region
L3077_01255 (rfaD)
BRITE hierarchy
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
Motif
Other DBs
NCBI-ProteinID:
UJZ90151
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Position
complement(247912..248838)
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AA seq
308 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDLGRKDILVVDNLKDGTKFANLVDLDIADYCDKEDFIASI
IAGDEFGDIDAVFHEGACSATTEWDGKYIMHNNYEYSKELLHYCLDREIPFFYASSAATY
GDTKVFREEREFEGPLNVYGYSKFLFDQYVRNILQEAKSPVCGFRYFNVYGPRENHKGSM
ASVAFHLNNQILKGENPKLFAGSEHFRRDFVYVGDVAAVNIWCWQNGISGIYNLGTGNAE
SFRAVADAVVKFHGKGEIETIPFPEHLKSRYQEYTQADLTKLRSTGYDKPFKTVAEGVAE
YMAWLNRK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaacaggcggcgcaggttttattggcagcaatattgtcaaagcattaaat
gatttagggcgcaaagatattttagtggtagataacttaaaagatggcacaaaattcgca
aatttagttgatttagacattgcagattattgtgataaagaagatttcattgcttctatt
attgcaggcgacgaatttggtgatattgatgcggtattccatgagggggcatgttctgcg
actacggaatgggatggtaaatacattatgcacaataactatgaatattctaaagagttg
ttgcactattgtcttgatcgcgaaatccctttcttctatgcctcaagtgcggcaacttat
ggtgatactaaagtattccgtgaagaacgtgaatttgaaggtccattaaatgtttatggc
tattctaaattcttgttcgaccaatatgtgcgcaacattttgcaagaagcaaaatcgcca
gtatgtggtttccgttatttcaatgtttacgggccgcgtgaaaatcataaaggttctatg
gcgagcgtagcattccacttgaataaccaaatcttaaaaggcgaaaatccaaaattattt
gcaggcagcgaacacttccgccgtgattttgtttatgtgggtgatgtggctgcagtgaat
atttggtgttggcaaaatggtatttctggtatttacaaccttggtacaggaaatgcagaa
agtttccgtgcggtggctgatgcggtagtgaaattccacggtaaaggcgagattgaaacc
attccattcccagagcatttgaaatctcgttatcaagaatatactcaagcagatttgact
aaacttcgctcaacaggctacgataaaccattcaaaacagtcgccgaaggcgtggctgaa
tatatggcatggttgaatagaaaataa
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