Haemophilus seminalis: L3077_02260
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Entry
L3077_02260 CDS
T08114
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hsem
Haemophilus seminalis
Pathway
hsem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L3077_02260 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsem03019
]
L3077_02260 (recQ)
03400 DNA repair and recombination proteins [BR:
hsem03400
]
L3077_02260 (recQ)
Enzymes [BR:
hsem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L3077_02260 (recQ)
Messenger RNA biogenesis [BR:
hsem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L3077_02260 (recQ)
DNA repair and recombination proteins [BR:
hsem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L3077_02260 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
HEM4
MksE
Motif
Other DBs
NCBI-ProteinID:
UJZ90325
LinkDB
All DBs
Position
443181..445040
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AA seq
619 aa
AA seq
DB search
MLDSPLSPKIIEKPTALSVLKSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCY
QIPALCFEGLTLVISPLISLMKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISGQLK
LLYVSPEKVMTNSFFPLISYSKVSFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPHAPI
MALTATADYATRQDILTHLKLENPHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLVQKGK
SGIIYCNSRNKVERIAESLRNKGVSAAAYHAGMETALRERVQQDFQRDNVQVVVATIAFG
MGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLQKILLEKTE
TPQRQIEQHKLEAIGEFAESQTCRRLVLLNYFGEHRQTPCNNCDICLDPPKKYDGLVDAQ
KVMSTIYRVGQCFGAHYVIAVLRGMHNQKIIERQHDKLSVYGIGKDKSKEHWQSVIRQLI
HLGFVQQVISELNTTLQLTESAKAILKGEEPLELAMPRISAISKIAHNPQRQGVANYDKD
LFARLRFLRKQIADKENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQP
FMVLIQEHKAILAKSQNNQ
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcttgattctcctttatcaccaaaaataatagaaaaaccgaccgcactttctgttttg
aaatcggttttcggttatcaatctttccgtaaaggacaggaagaagtcatcaatgccgca
ttaaacggacaagatgctttggtggtaatggcaacagggaatggcaaatcgctttgttac
caaattcccgcgctttgttttgaggggttaactttagtgatttctccgctgatttccttg
atgaaagatcaagtagatcagcttcaagctaatggaattgaggcagattttcttaattct
agtcagactttagaacagcagcaacaagtacaaaataagcttatttctgggcaacttaaa
ctgctttatgtgtcgccagaaaaagtgatgacgaacagtttctttccacttatttcttat
agtaaagtcagctttattgcgattgatgaagcacactgcatttctcaatgggggcatgat
tttcgccctgagtatacccagcttggcggtttaaaagctagtttccctcatgcgccaatt
atggcgctcaccgcgacagcagattatgccactcgccaagatattttgactcacctcaag
ctggaaaatccgcataaatatattggtagttttgatcgaccaaacattcgttataccttg
gaagaaaaatataaaccaatggagcaattgacgcgttttgtgttggttcaaaagggcaag
agtgggattatttattgcaacagccggaacaaggttgagcgaattgcggaaagtttacgc
aataaaggcgtctctgctgcagcttatcatgcgggaatggaaacggcactgcgtgagcgc
gtgcaacaagattttcagcgtgataatgttcaagtggtggtcgcaaccattgcttttgga
atggggattaataaatccaatgtacggtttgttgcccattttgatttacctcgtagcatt
gaatcttactatcaggaaacggggcgagcgggacgtgatgatttaccagctgaggcggtt
ttgttttatgagccagcggattacgcttggttacaaaaaattcttttagaaaaaacagaa
acgccacagcgtcagattgagcaacataaattagaagctattggtgaatttgcagaaagc
cagacctgtcgccgtttagtgcttctcaattattttggtgagcatagacaaacaccgtgc
aataattgtgatatttgccttgatcctcctaaaaaatatgatggattagtcgatgcgcaa
aaagtaatgtctactatttatcgagtgggacaatgtttcggtgcacattatgtgattgcg
gtgctgcgtggcatgcacaatcaaaaaattattgaacgccaacatgataaactttcagta
tatggcattggaaaagataaaagcaaagagcattggcagtctgtcattcgtcagcttatc
catttgggttttgtgcaacaggtcattagcgaattaaatacaacgttacaacttactgaa
agtgcaaaagcgattttgaaaggtgaggaaccattggaactggcaatgcctcgtatttct
gcaattagtaagattgcccataatccacaacgtcaaggtgttgcaaattacgataaggat
ttatttgcacgcttgcgtttcttacgcaaacaaattgccgataaagaaaatattccgccg
tacattgtctttaatgatgcgacgttgcaagaaatggcacaatatatgccaacaagcaat
attgaaatgctgcaaattaatggtgtgggctctatcaaattagaacggtttggccagccg
tttatggtattgattcaggaacataaagcaattttggcgaaatcgcaaaataatcagtaa
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