Haemophilus seminalis: L3077_03275
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Entry
L3077_03275 CDS
T08114
Symbol
cas4
Name
(GenBank) CRISPR-associated protein Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
hsem
Haemophilus seminalis
Brite
KEGG Orthology (KO) [BR:
hsem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
hsem02048
]
L3077_03275 (cas4)
Enzymes [BR:
hsem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
L3077_03275 (cas4)
Prokaryotic defense system [BR:
hsem02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
L3077_03275 (cas4)
Subtype I-B factors
L3077_03275 (cas4)
Subtype I-C factors
L3077_03275 (cas4)
Subtype I-D factors
L3077_03275 (cas4)
Type II CRISPR-Cas system
Subtype II-B factors
L3077_03275 (cas4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas4
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UJZ90513
LinkDB
All DBs
Position
654402..655052
Genome browser
AA seq
216 aa
AA seq
DB search
MTALLTKTQGENQDTRLIPLSALQHYAFCPRQCALIHNEQAWVENYLTAQGKALHERVDS
GEPETRKGIRFERTVHVSAEKLGISGVLDLVEVDTKTGRLKPVEYKRGNPKSDPMDEIQL
CVQGLCLEEMTGQTVSEGALWYMQTRHRVPVVFSDDLRAQTLATIAAVRELLNSGQTPPP
DYGKRCKACSLVEICQPELLGKRDRSVGYVAELFCE
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcacttttaaccaaaacccaaggggaaaatcaggacacgcgcctgattcccctt
tccgccctgcaacactacgccttctgcccgcgccaatgcgcgttgattcataacgagcag
gcgtgggtggagaactatttgaccgcgcaaggcaaggcgttgcatgagcgggtggattca
ggcgagccggaaacgcgcaagggcatacgatttgagcggacggtgcatgtgtcggcggaa
aaactgggcatcagcggcgtgttggatttagtggaagtggatacaaaaacaggccgtctg
aaacctgtggaatacaaacgcggcaaccccaaatccgacccgatggacgaaatccagctt
tgcgtccaaggcttgtgcttggaagaaatgacggggcaaaccgtctctgagggcgcgctg
tggtatatgcaaacccgccaccgcgtccccgtcgtgttttcagacgacctgcgcgcccaa
accctcgccaccatcgctgccgtgcgcgaacttttaaacagcggccaaaccccgccaccc
gactacggcaaacgctgcaaagcctgctcactggtggagatttgtcagccggaattgctg
gggaaacgggataggagtgtggggtatgtggctgagctattttgcgaatag
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integrated database retrieval system
