Halanaeroarchaeum sulfurireducens M27-SA2: HLASA_0580
Help
Entry
HLASA_0580 CDS
T04261
Symbol
tfb4
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hsf
Halanaeroarchaeum sulfurireducens M27-SA2
Pathway
hsf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HLASA_0580 (tfb4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsf03021
]
HLASA_0580 (tfb4)
Transcription machinery [BR:
hsf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HLASA_0580 (tfb4)
Prokaryotic type
Archaeal type
TFB
HLASA_0580 (tfb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
A2L_zn_ribbon
Zn_ribbon_IS1595
zf-tcix
Lar_restr_allev
Zn_Ribbon_YjdM
Zn_ribbon_3
Zn_ribbon_8
Sigma70_r4
Cyclin_C
Zn_ribbon_LysW
Zn_ribbon_PaaD
Zn_ribbon_Top1
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
ALG81481
UniProt:
A0A0N9N171
LinkDB
All DBs
Position
complement(564081..565037)
Genome browser
AA seq
318 aa
AA seq
DB search
MTRSTRQRERNTAEEETDEGVRECPECGSDNLVKSSDRAELVCDDCGLVVEEEKIDPGPE
WRAFNHQERQQKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRLRKWQE
RIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALKEDLTRGRSIEGVATS
ALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMKPVDPKKYVPRFCSEL
KLSEEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQVTE
VTIRNRYQEQIEAMGIHG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacacggtccactcgccagcgggagcgaaacactgctgaagaagagaccgacgagggg
gtgcgggagtgtccggagtgcgggtctgacaacctggtcaagagttcggaccgggcggaa
ctcgtctgtgacgactgcggcctcgtggtcgaggaggagaagatcgacccagggccggag
tggcgggcgttcaaccaccaggaacgccagcagaagtcacgtgtgggtgccccgacgacc
cagacgatgcacgacaaggggctgacgaccaccatcgactggaaggacaaggacgcctac
ggtcgctctatctcgtcgaagaagcgctcgcagatgcatcggctcagaaaatggcaggaa
cggatccgaacgaaagacgccggcgagcgcaacctccagttcgcgctctcagaaatcgat
cgaatggcgagtgcgctcggcgtcccgcgctccgtgcgggaggtcgcctcggtcatctac
cgtcgcgctctcaaagaggatctcacacggggacggtccatcgagggggtcgcgacctcc
gccctctacgcggcctgtcgaaaggagggcattccgcgaagtctcgaggagatctccgag
gtctcccgtgtcgaacgcaaggagatcgggcggacctatcgatatatctcacaggaactc
ggcctcgagatgaaaccggtcgatccgaagaagtacgtcccccgtttttgctccgaactc
aaactctccgaagaggtccagtcgaaagccaacgaaatcatcgagacgacggccgagaag
gggttgctctccgggaagtctccaactgggtacgcggccgccgccatctacgccgcatcg
cttctgtgcaacgagaagaagacccagcgcgaggtcgccgatgtcgcccaggtgaccgag
gtgacgattcggaaccggtatcaagagcagatcgaggcgatgggtatccacgggtaa
DBGET
integrated database retrieval system
