Halanaeroarchaeum sulfurireducens M27-SA2: HLASA_0648
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Entry
HLASA_0648 CDS
T04261
Symbol
topA1
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hsf
Halanaeroarchaeum sulfurireducens M27-SA2
Brite
KEGG Orthology (KO) [BR:
hsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsf03032
]
HLASA_0648 (topA1)
03400 DNA repair and recombination proteins [BR:
hsf03400
]
HLASA_0648 (topA1)
Enzymes [BR:
hsf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HLASA_0648 (topA1)
DNA replication proteins [BR:
hsf03032
]
Prokaryotic type
DNA Topoisomerases
HLASA_0648 (topA1)
DNA repair and recombination proteins [BR:
hsf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HLASA_0648 (topA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
DUF4332
HHH
Cdd1
DNA_pol_lambd_f
IMS_HHH_1
Toprim_4
Toprim_2
DUF1266
Motif
Other DBs
NCBI-ProteinID:
ALG81549
UniProt:
A0A0N9N1F0
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Position
631617..634100
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AA seq
827 aa
AA seq
DB search
MELIVTEKHKAARRIADILSDGSATTERVGSVDVYRWGTHRVIGLSGHVVGKDFPEEYAE
WRDVEPAELVHAPVQKRPTQDDIVRAVKRLARKADEVVIATDYDREGELIGKEAYELVRE
ENDDAPVHRVRFSSITENEVKDAFANPDDLDFDLAAAGEARQIVDLIWGAALTRFLSLSA
QQRGEDFISVGRVQTPTLRLIVEKEREIDAFDPEDYWELFADLAKNGDAFEAQYFYRDED
DTEAERIWDEADAKTATDILEDESQAVVESVSRRTRTDDPPAPFNTTQFIRAAGSLGFAA
GRAMSIAEDLYTAGYITYPRTDNTVYPDDLDPEELLETFAETSAFGSDASSLLEADSIEP
TRGDTETTDHPPIHPTPDQPARGDLTEDEWQVYELVVRRFFATVAEPAVWEHLRVVAETA
GLRLKANGKRLREPGYHQVYPYFSTDENYVPDVSEGETLSIEDVRLEDKETQPPRRYGQS
RLIETMEDLGIGTKSTRHNTLEKLYDRGYIEEDPPRPTRLARAVVEAAEEFADLIVSEEM
TGELEAEMTAIANGEKTLEEVTEDSRDALDRIFAELAESREEIGEHLQESLKADKTLGPC
PECGEDLLVRQSRQGSYFVGCDGYPDCRFTLPLPNTGEPVVLLETCEEHGLREVKMLAGR
NTFVHGCPLCKAEEADDEEDRIIGPCPECHDEHGGELAIKRLRNGNRLVGCTRYPDCEYS
LPLPRRGEIEITDEYCEEHDLPELVVHDGDEPWELGCPICNYEEYAAERESADLESLDGV
GPTTAERLRDAGVDTVGDVADVDPDDLADQVKGVSADTVREWQADAD
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
gtggagctcatcgtaaccgagaaacacaaagcggcacgtcgcatcgccgacattctcagc
gacggatccgcgacgaccgaacgcgtcggcagcgtcgacgtgtatcgctggggaacgcat
cgggtcatcggcctgtcgggccacgtcgtcggaaaggacttccccgaggagtacgccgag
tggcgcgacgtcgaaccggccgagctggttcacgcgccggtacagaagcgaccgacccag
gacgacatcgtccgggcggtgaagcgactggcccgcaaggccgacgaggtcgtcatcgcg
accgactacgatcgcgagggagaactcatcggcaaggaggcctacgaactcgtgcgggag
gaaaacgacgacgcgcccgtccacagggtccggttttcctccatcaccgaaaacgaggtc
aaagacgccttcgcgaatcccgacgatctggatttcgatctcgccgcggcgggcgaggcc
cgccagatcgtcgacctgatctggggtgccgcgctcacgcgctttctgtccctgtcggca
caacagcggggtgaggacttcatcagcgtcggccgggtccagactcccacactccggctc
atcgtcgagaaggaacgggaaatcgacgccttcgaccccgaggactactgggaactgttc
gcggacctggcgaaaaacggcgacgccttcgaggcgcagtatttctaccgcgacgaggac
gacaccgaggccgagcgaatctgggacgaggcggacgccaagacggcgaccgacatcctc
gaggacgaatcgcaggccgtcgtcgagtccgtctcgcggcgaacccgcaccgacgacccc
ccggcaccgttcaacaccacccagttcatccgtgccgccgggtcgctcggattcgcggcc
ggtcgcgcgatgagcatcgccgaggacctctatactgcggggtacatcacctatccacgg
accgacaatacggtctatccggacgacctcgaccccgaggaactcctcgagacgttcgcc
gagacgagcgcgttcggttccgacgcctcatcgctgctcgaggccgattccatcgagccg
acacggggcgacaccgagacgaccgaccaccccccgatccatcccacgccggatcagccc
gcacggggggacctcaccgaggacgagtggcaggtctacgagctcgtcgtccggcggttt
ttcgcgaccgtcgccgagcccgccgtgtgggagcacctgcgtgtcgtggccgagacggcc
ggcctccggctgaaggccaacgggaagcgcctgcgcgagccgggctaccaccaggtctat
ccgtacttcagtaccgacgagaactacgtccccgacgtttccgagggcgagacgctctcg
atcgaggacgtccgactcgaggacaaggagacccagccgccccggcgatacggccagtcg
cggctcatcgagacgatggaggacctgggcatcgggacgaagagcacgcgacacaatacg
ctcgagaagctctacgatcgtggctacatcgaggaggacccgccccgcccgacccgcctc
gcacgcgccgtggtcgaggcggccgaggagttcgccgacctcatcgtcagcgaggagatg
accggcgaactcgaggcggagatgacggccatcgccaacggcgagaagaccttagaggag
gtcaccgaggactcccgggacgccctggaccgcattttcgcggaactggccgagtcacgc
gaggagatcggcgaacacctccaggagtcgctcaaggcggacaagacgctgggtccctgc
ccggagtgtggcgaggacctgctcgtccgccagagccggcaggggtcatacttcgtcggg
tgcgacggctaccccgactgccggttcacgctcccgctcccgaacaccggggaaccggtg
gtgctcctcgagacctgcgaggagcacggcctccgggaagtcaagatgctcgccggccgc
aacaccttcgtccacggctgtccgctgtgcaaggccgaggaggccgacgacgaggaggac
cggatcatcggcccgtgtccggagtgccacgacgaacacggtggcgaactcgcgatcaag
cggctccgcaacgggaatcgcctcgtgggctgtacgcgctatcccgactgcgagtactcc
ctgcccctcccgcggcggggcgagatcgaaatcaccgacgaatactgcgaggaacacgac
ctccccgaactcgtggtccacgacggcgacgagccgtgggaactcggctgtcccatctgt
aactacgaggagtacgccgccgaacgggagtccgcggacctcgaatcgctggatggtgtg
gggccgacgaccgccgaacgactccgtgacgcgggcgtcgacacggtgggcgacgtcgcc
gacgtggacccggacgacctggccgaccaggtaaagggggtctcggccgacaccgtccgc
gagtggcaggcggacgccgactga
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