Halanaeroarchaeum sulfurireducens M27-SA2: HLASA_2144
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Entry
HLASA_2144 CDS
T04261
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hsf
Halanaeroarchaeum sulfurireducens M27-SA2
Brite
KEGG Orthology (KO) [BR:
hsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsf03016
]
HLASA_2144
Enzymes [BR:
hsf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HLASA_2144
Transfer RNA biogenesis [BR:
hsf03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HLASA_2144
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
ALG83014
UniProt:
A0A0N9N813
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All DBs
Position
2071656..2072213
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AA seq
185 aa
AA seq
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MRLFVSVDLPDDLTEEVAAVQDRLEDASGLDFTDPAQAHVTMKFLGETPPHQVDEIVDAL
ETAVEESGVAPFEATYGGLGVFPSLRYISVVWLGVSDGEREFERLHAPIESELVDIGFDE
ADHEFTPHVTLARMNHAGGKDLVQRVVREESPVVWTATVGEVQLTESTLTSEGPVYETVA
SVPLE
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgttcgtgagcgtcgacctcccggatgacctgaccgaggaggtcgccgcagta
caggacagactcgaggacgcatcgggactcgacttcaccgacccggcccaggcccacgtg
acgatgaagttcctcggcgagacgcccccacaccaggtggacgaaatcgtcgacgcgctc
gagacggccgtcgaggaatccggcgtcgcgcccttcgaggcgacctatggcggactgggc
gtcttcccttccctcagatacatcagcgtggtctggctcggcgtgagcgacggggagcgg
gaattcgaacgcctgcacgccccgatcgaatccgaactcgtcgacatcgggttcgacgag
gccgaccacgagttcaccccccacgtgaccctcgcgcggatgaaccacgccggcgggaag
gacctcgtccagcgcgtggttcgggaggagtcgccggtcgtttggacggccaccgtcggg
gaggtccagctcaccgaaagcacgctcacctccgagggcccggtctacgagacggtcgcc
agcgttccgctggagtga
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