Halanaeroarchaeum sulfurireducens M27-SA2: HLASA_3007
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Entry
HLASA_3007 CDS
T04261
Name
(GenBank) transcription factor
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hsf
Halanaeroarchaeum sulfurireducens M27-SA2
Pathway
hsf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HLASA_3007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsf03000
]
HLASA_3007
03021 Transcription machinery [BR:
hsf03021
]
HLASA_3007
Transcription factors [BR:
hsf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
HLASA_3007
Transcription machinery [BR:
hsf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
HLASA_3007
RNA polymerase III system
TFIIIB
HLASA_3007
RNA polymerase I system
SL1/TIF-1B
HLASA_3007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
ALG83075
UniProt:
A0A0F7PHA1
LinkDB
All DBs
Position
pM27-SA2-01:complement(10932..11477)
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AA seq
181 aa
AA seq
DB search
MGGLAVEVVNIVAGGDLRVEVDIEELANDSKLPVANYEPENNATFLRFEEDGELIILYTS
GKYILRGGDDFDTMYQVNDRFLSNLTEMGLEFSDPSLEVKNVVSVGELEKDIELNALMIA
LGLEDTEYEPEQFPGLIYRPDSTRCVLLVFSSGKVVITGGRTAEEDEEAFLRLQNQVNDL
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgggtggactagcagttgaagttgtgaatattgtggcaggaggtgatctaagggttgaa
gtagatattgaggaactcgctaatgactcaaagctgcccgttgccaactacgagcccgag
aataacgctactttccttcgattcgaagaagacggcgaactaataattctgtatacctct
gggaaatacattctccgtggaggtgatgacttcgacacgatgtaccaggtcaacgatcgg
ttcttgtccaatctcacagagatggggctggaattcagtgacccatcgcttgaggtgaag
aacgtagtctcagtcggggaacttgagaaagatattgagctgaacgcgctgatgatcgca
ttagggttagaagatacagaatatgagcccgagcaattccccggtttgatttatcggcct
gattctactcgctgtgtcttgttggtcttctccagtgggaaagtagtcatcacgggtgga
cgtactgctgaagaagacgaagaagcctttctccgcctccagaatcaggtaaatgacctt
ctgtaa
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