Halanaeroarchaeum sulfurireducens M27-SA2: HLASA_3094
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Entry
HLASA_3094 CDS
T04261
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hsf
Halanaeroarchaeum sulfurireducens M27-SA2
Pathway
hsf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HLASA_3094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsf03021
]
HLASA_3094
Transcription machinery [BR:
hsf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HLASA_3094
Prokaryotic type
Archaeal type
TFB
HLASA_3094
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR
DZR_2
DUF8122
RB_B
Cyclin_C
Motif
Other DBs
NCBI-ProteinID:
ALG83162
UniProt:
A0A0N9MMD3
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All DBs
Position
pM27-SA2-01:105860..106795
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AA seq
311 aa
AA seq
DB search
MSIMATREIYETAFDEDVQTHSSANQCPECDGRVTTNAVETVCEECGLVVNEHQIDHGPE
WRAFDEDERERTGAPLTAARHDRGLSTEIGHGADANGNTLSGRKRRQVARMRREQTRGRF
QSEAERNLAHGLGEVRRIVSTLELSETIRDQACRLFRSAQNEDLLPGRSIEAMATASVYG
ACRCNGISRTLDDVTDPARVEKSRVTNAYKTLNTELGLPAKPVTPSAFVPRLASELDVPD
QIRQRARKLAEDSESTGVTTGVRPSGFAAACLYKAGHEQGQLFTQSAVAEAANVSPVTVR
SHRDALDELAV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgagtatcatggcaaccagagagatctacgagacggcattcgatgaagacgtacagact
cactccagcgcgaaccagtgccccgaatgcgacggtcgggtcaccaccaatgcggtcgaa
accgtctgcgaggagtgtggcctcgtcgtcaatgagcaccagatcgatcacgggcccgaa
tggcgagcattcgacgaggacgaacgggaacgaacgggtgcgccactgactgcggcgcga
cacgatcggggcctatcgaccgaaatcggccatggggctgacgcaaatgggaacacactc
tccggacggaagcgccgtcaagtcgcccggatgcgccgggaacagactcgtgggcggttt
cagtcggaagccgagcgcaacctcgcacacgggctgggtgaggtccgccggatcgtgagt
acactcgagttgtccgagacgattcgcgaccaggcgtgtcggctcttccgcagtgctcag
aacgaagacctcctgccgggccggtcgatcgaagcgatggccaccgcgagcgtctacgga
gcctgtcggtgtaacgggatctcgcggacgctcgacgacgtcaccgacccggcacgcgtc
gagaaatcgcgcgtgacgaacgcctacaagacgctgaatacggaactcggcctcccagcc
aagcccgtgacgcccagtgcgttcgttccgcggctcgcgtcggaactcgacgtcccagat
cagatccgtcaacgagccaggaagttggcagaagattccgaatcgacgggagttaccacg
ggcgtccgcccgtcaggattcgccgcggcctgcctgtacaaagcagggcacgaacagggc
cagttgttcacacagtcagcggtcgcagaggccgcgaacgtctcaccggtaaccgtccga
tctcaccgagacgcgctggacgaactagctgtctaa
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