Candidatus Hepatoplasma scabrum: HPPSJP_0790
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Entry
HPPSJP_0790 CDS
T09843
Symbol
rluD
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
hsg
Candidatus Hepatoplasma scabrum
Brite
KEGG Orthology (KO) [BR:
hsg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsg03009
]
HPPSJP_0790 (rluD)
Enzymes [BR:
hsg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HPPSJP_0790 (rluD)
Ribosome biogenesis [BR:
hsg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HPPSJP_0790 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF7103
FHA
Tae4
Motif
Other DBs
NCBI-ProteinID:
BDV03358
LinkDB
All DBs
Position
84976..85917
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AA seq
313 aa
AA seq
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MEFNFTNLKSIRIDKYLIEILKDQQIQLTRSKISDLIKKKGIFVNGKLITKSGYLLKGNG
IIKISDLFLDQEDNQNLNKWYNSELIDIIFETDDYIVINKPSNLSVYPGSGSRDDTLVNI
LISLRSDLANIETKRPGIVHRIDKNTSGVLIIAKNDNFANYLQKQFKERKIYKEYLAITN
GNLPSKKGIIDAPIGRNVNNRKLMTVTNKNSKYAITEYEVIKRFTNYDYLKLILKTGRTH
QIRVHLKFLNTPILNDFDYGRKIKSNNIYGQFLHAYKICFYDYESNKKCYTAKLPSYFRK
QLDILKRNKNGEN
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaattttacaaatttaaaatcgatccggattgataaatatttaattgagata
ttaaaagatcaacaaatacaattaacaagaagtaaaattagtgatttaattaagaaaaaa
ggaatatttgttaacggaaaattaataacaaaatccggatatcttttaaaagggaacgga
attataaaaattagcgatctttttttagatcaagaagataatcaaaatttaaataaatga
tacaattcggaattaattgatataatttttgaaacagatgattatattgtaattaataaa
ccatctaacttatctgtttaccctggatctggaagtagagatgatactttagttaatatt
cttatttcattaaggagtgatttagctaatattgaaactaaaagaccgggaattgttcat
agaattgacaaaaatacttctggcgtgctaataatagccaaaaatgataattttgctaat
tatttgcaaaaacaatttaaagagcgaaaaatatataaagaatatttagcaataaccaac
gggaatcttccatctaaaaagggaataatagatgctccaattggaagaaatgttaataat
agaaaattgatgacggtaactaataaaaatagtaaatatgcgattactgagtatgaagtt
attaaaagatttacaaattatgattatttaaaattaattttaaaaacaggaagaacacat
caaattcgtgttcatttgaaatttttaaatactcctattttaaatgattttgattatggt
agaaaaataaaaagtaataatatttatggtcagttcttacatgcttataaaatttgtttt
tatgattatgaaagtaataaaaaatgttatacagcaaaattaccttcttattttagaaag
caattagatattttaaaaaggaataaaaatggcgaaaattag
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