Candidatus Hepatoplasma scabrum: HPPSJP_0870
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Entry
HPPSJP_0870 CDS
T09843
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
hsg
Candidatus Hepatoplasma scabrum
Brite
KEGG Orthology (KO) [BR:
hsg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsg03032
]
HPPSJP_0870
03036 Chromosome and associated proteins [BR:
hsg03036
]
HPPSJP_0870
03400 DNA repair and recombination proteins [BR:
hsg03400
]
HPPSJP_0870
DNA replication proteins [BR:
hsg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HPPSJP_0870
Chromosome and associated proteins [BR:
hsg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HPPSJP_0870
DNA repair and recombination proteins [BR:
hsg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HPPSJP_0870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
2C_adapt
Motif
Other DBs
NCBI-ProteinID:
BDV03366
LinkDB
All DBs
Position
93532..93810
Genome browser
AA seq
92 aa
AA seq
DB search
MNNKKDLFEDISKNTSIAKKDVQEIFNLIFINVEKSLKSNEEFAIPQFGKFKLVSRQARE
ARNPRTGEKIKIPAQKAVVFRPSKTLKMKFNN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaaaaagatttatttgaagatatttcaaaaaacacaagcatagcaaaaaaa
gatgttcaagaaatttttaatttgatttttataaatgtagaaaaatctttaaaatcaaat
gaagaatttgcaattccgcaatttggtaaatttaaattagtttctcgacaagcaagggaa
gcaagaaatccaagaacaggggaaaaaataaaaattcctgctcaaaaagctgttgttttt
agaccttcaaaaaccttaaaaatgaaatttaataattaa
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