Candidatus Hepatoplasma scabrum: HPPSJP_1140
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Entry
HPPSJP_1140 CDS
T09843
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hsg
Candidatus Hepatoplasma scabrum
Pathway
hsg00260
Glycine, serine and threonine metabolism
hsg00630
Glyoxylate and dicarboxylate metabolism
hsg00670
One carbon pool by folate
hsg00680
Methane metabolism
hsg01100
Metabolic pathways
hsg01110
Biosynthesis of secondary metabolites
hsg01120
Microbial metabolism in diverse environments
hsg01200
Carbon metabolism
hsg01230
Biosynthesis of amino acids
hsg01240
Biosynthesis of cofactors
hsg04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hsg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HPPSJP_1140 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HPPSJP_1140 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HPPSJP_1140 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HPPSJP_1140 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HPPSJP_1140 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HPPSJP_1140 (glyA)
Enzymes [BR:
hsg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HPPSJP_1140 (glyA)
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Motif
Pfam:
SHMT
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
SelA
RADX
Motif
Other DBs
NCBI-ProteinID:
BDV03393
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All DBs
Position
119045..120199
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AA seq
384 aa
AA seq
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MRDREIEKLILLEKKRQDKEIELIASENFVSNDILEATGSILTNKYAEGYPNARYYEGCE
NVDKIETLAIERLKKLFNAKYANVQPHSGTQANLAAYNALLKPGAKILGLSLSSGGHLSH
GFKITISGTFYKSYTYEVDPKTNLLDYDNILQIAKKVKPDLIICGYSAYPRIIDFKKFRA
IADTVGAYLLADIAHIAGLVAAKLHPNPLDFGVDIVTSTTHKTLRGPRGGIILTNKEEIF
KKINSSVFPASQGGPLMHVIAAKAVAFYEALDKSFISYQKQVIENAKVLANRLIEHNVKI
TTNGTDNHLLLVDVKKSFNLTGAEAEKILKKHHITVNKNAIPFDKLSPKIASGIRLGTAA
MTTKGWKEADFIKLADKIYQLLQK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgagagatcgagaaattgaaaaattaattttattagaaaagaaaagacaagataaagaa
attgaactaattgcatcagaaaattttgtctcaaatgatatattagaagcaacgggatca
attcttacaaataaatatgcagaaggatatccgaacgcaagatattatgagggttgtgaa
aatgtcgacaagattgaaacacttgcgatcgagagacttaaaaaattatttaatgcaaaa
tatgcaaatgtgcaaccacattcaggaacacaggcaaatcttgccgcttataatgcttta
ttaaaaccaggagcaaaaatcttaggattatcacttagttccggtggtcatttaagccac
ggctttaaaatcacaatcagtggaactttttataaatcttatacttatgaagttgatcca
aaaacaaatcttttagattatgataatatcttgcaaattgctaaaaaagtaaaacctgat
ctgataatttgtggatattcagcttatccaagaattattgattttaaaaaatttagagcg
atagccgatactgtcggcgcttatctgcttgcagatatcgcccatatcgctggacttgtt
gctgctaaattacatcctaatccgcttgattttggtgttgatattgtcacttctacaact
cataaaactttaagaggaccaagaggaggaattattcttacaaataaggaagagatattt
aaaaaaattaatagttctgttttcccagctagtcaaggaggccctttaatgcatgtgatc
gctgcaaaagcagttgctttttatgaagccttagataaatcttttatttcctatcaaaaa
caggttattgaaaacgcaaaggttttagcgaatagacttattgagcataatgtaaaaatc
acaacaaatggaaccgataatcatctattattagttgatgtaaaaaaaagttttaatcta
accggagctgaagcagaaaaaattttaaaaaaacatcatattacagttaataaaaatgcg
atcccttttgataaattaagtcctaaaattgcttctggaattagattaggaacggcagcg
atgacaacaaaaggatgaaaggaagctgattttattaaattagctgataagatctatcaa
ttattacaaaaataa
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