Candidatus Hepatoplasma scabrum: HPPSJP_1400
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Entry
HPPSJP_1400 CDS
T09843
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hsg
Candidatus Hepatoplasma scabrum
Pathway
hsg02024
Quorum sensing
hsg03060
Protein export
hsg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hsg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HPPSJP_1400 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HPPSJP_1400 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPPSJP_1400 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hsg02044
]
HPPSJP_1400 (ffh)
Enzymes [BR:
hsg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HPPSJP_1400 (ffh)
Secretion system [BR:
hsg02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HPPSJP_1400 (ffh)
Eukaryotic Sec-SRP protein
HPPSJP_1400 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
AAA_17
AAA_33
nSTAND3
DO-GTPase1
ATPase_2
AAA_14
cobW
AAA_19
CbiA
SLFN-g3_helicase
SRPRB
Pox_A32
AAA_7
AAA_16
MobB
ResIII
Roc
NB-ARC
AAA
NPHP3_N
AAA_24
T2SSE
AAA_30
ABC_tran
NACHT
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BDV03419
LinkDB
All DBs
Position
147666..149027
Genome browser
AA seq
453 aa
AA seq
DB search
MVFNFMQKRLEKTIRKVQSKGLLSKENIEDILKEVRLILLESDVNLKVTDDFISFIEKKA
IGKVIDTDRTSSQEILRIIYDELVNILGKEAKKWNFQSRSIVMMVGLQGSGKTTTVAKLV
NNLFKKEKRYKNPLIVALDIYRPAAIDQLETLAKKINVAFYAERAEKDVLKIAKNALEFA
NKNNHDLIILDTAGRLQTDQKLMTELQMIKKIFIPTDIIFVADGFSGQEILNVAEEFNNK
LKLSSIIVTKMDSNAKGGAIFSLAYWLKIPISYLGMGEKIANLEIFYPNRIASRILGLGD
IETLTEKAQELGNEKAQEKMFRKMMAGKFDLDDLLVSMEQLSKMGNLGAITRLLPSFGKL
RNLSEDKINSAQTKLEVYKILINSMTNKERKNPRLLKHQKRKERILKGSGRTAQEYNDLL
RQFEKMQKQIMQLSKVLKAGKIPDLSKIGNGFF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggtatttaattttatgcagaaacgtttagaaaaaactattcgtaaagttcaatctaaa
ggattattaagtaaagaaaatattgaagatattttaaaagaagtaagacttattttatta
gaatcagatgttaatttaaaagtaacagatgattttatttcttttattgaaaaaaaagca
attggaaaagttatcgacacagatcgtacttcttcgcaagaaattcttagaattatttat
gatgagcttgttaatattttaggaaaagaagcaaagaagtgaaattttcaatcaagatca
attgtgatgatggttgggcttcaaggttcagggaaaacaaccactgttgcaaaattagta
aataacttatttaaaaaagaaaaaagatataaaaatcctttaattgtggcgttagatata
tatcgaccagcagcgattgatcaattagaaacattggctaaaaaaataaatgttgccttt
tatgcagaaagagcagaaaaagatgttcttaaaattgccaaaaatgctttagaatttgct
aataaaaataatcatgatttaattattttagatacagcagggcgtttacagactgatcaa
aaattgatgacagaattgcaaatgattaaaaagatttttattcctactgatattattttt
gttgctgatggattttcgggacaagagattttaaatgtagcggaagaatttaataataaa
cttaaattatcttcaattatcgttacaaagatggattcaaatgcaaagggtggagctatt
ttttctcttgcttattgattaaaaattcctatttcttatcttggaatgggtgaaaagatc
gcaaatcttgagattttttatcctaatcgaattgcttcaagaattcttggccttggtgat
attgaaacgcttaccgaaaaggcacaagaattaggaaacgaaaaagcacaagaaaagatg
tttcgcaagatgatggccggaaaatttgatcttgatgatttacttgtatcgatggaacaa
ttaagcaaaatgggtaatttaggagcaattacaagattactaccaagttttggaaaacta
cgcaatttatctgaagataaaattaattcagcacagacaaaacttgaagtttataagata
ttaataaattcgatgacaaataaagaacgtaaaaatcctcgtttattaaaacatcaaaaa
cgtaaagaacgaattctaaaaggttcaggtcgaaccgcccaagaatataatgatttattg
agacagtttgaaaaaatgcaaaaacaaattatgcaattatcaaaagttttaaaagcagga
aaaattcctgatttaagtaaaatcggaaatggatttttttaa
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