Candidatus Hepatoplasma scabrum: HPPSJP_1640
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Entry
HPPSJP_1640 CDS
T09843
Name
(GenBank) hypothetical protein
KO
K02600
transcription termination/antitermination protein NusA
Organism
hsg
Candidatus Hepatoplasma scabrum
Brite
KEGG Orthology (KO) [BR:
hsg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsg03021
]
HPPSJP_1640
03009 Ribosome biogenesis [BR:
hsg03009
]
HPPSJP_1640
Transcription machinery [BR:
hsg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HPPSJP_1640
Ribosome biogenesis [BR:
hsg03009
]
Prokaryotic type
rRNA transcription factors
HPPSJP_1640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_1
Motif
Other DBs
NCBI-ProteinID:
BDV03443
LinkDB
All DBs
Position
172678..173928
Genome browser
AA seq
416 aa
AA seq
DB search
MNIKNQQKKIVEALKSFAELKGITKEEIKKLLEESFLKALNKEYENDLESKEIMLPLFDI
SVKLDEGKIDVKRKWILTDQPVDEKEINVKKNIKEANLKEIKDDFYFENISLASIKHDSF
FLYIKQLFTQKVSEAEKVKIYEKFIDYKDHIIKAKVEKSSFTHYLLSYQGNIIFLSKKET
SRLDQFKIGDFIYVYITNIEKSSKDAQIIASRRNPQFVIKLLEKEIEDVADGVIKIEKIA
RQAGFKTKVLVWSTLDEVDAVGSIIGVKGQKIKAIIDELRGERIDIIEYSKDINIQIARA
VIPGKIIGIKKESEEKYILVTEERDFLSVLGKGGLNIKLVANLVDKKLDVKTKKTAEEES
IKYQYITLSSYNQNRNVRKNFSKIVNENYDENYDLVEDLASMEEYDDYDQELDKRY
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaatataaaaaatcaacaaaaaaagatagttgaagcacttaaatcatttgctgaatta
aaaggtattacaaaagaagaaattaagaaattattagaagagtcttttttaaaagcttta
aataaagaatacgaaaatgatttggaaagtaaagaaattatgcttcctctgtttgatatt
tcagtgaaattggatgagggaaaaattgatgttaaaagaaagtgaattttaacagatcaa
ccggttgatgaaaaagaaattaatgttaaaaaaaatattaaagaggcaaatttaaaagaa
ataaaagatgatttttattttgaaaatatttctttagcttcaataaaacatgatagcttt
tttctttatattaagcaattatttacacagaaagtttctgaagctgaaaaggttaaaatt
tatgaaaaatttatcgattataaagatcatatcatcaaagcaaaagtcgaaaaatcttca
tttacacattatcttttaagttatcaaggtaatatcatttttctttcaaaaaaagaaact
tcaagattagatcaatttaaaattggtgattttatttatgtatatattacaaatattgaa
aaatcttcaaaagatgcacaaattattgcttcaagaagaaatccacaatttgttataaaa
ttactagaaaaagaaattgaagatgttgccgatggagttatcaaaatagaaaaaattgct
agacaagcaggttttaagactaaagttcttgtttgaagtactttagatgaagttgatgct
gtcggatcgattatcggcgtaaaaggacaaaaaataaaggcgataattgatgaattaaga
ggtgagcgaattgatattattgaatatagtaaagatattaatattcaaattgcaagagct
gtaattcctggcaaaattatcggtattaaaaaagaaagtgaagaaaaatatattcttgta
acagaagaaagagattttttatcagtacttggaaaaggtggattaaatataaaattagtt
gccaatcttgttgataaaaaattagatgttaaaaccaaaaaaacagcagaagaggaaagt
attaaatatcaatatattacactttcttcatataatcaaaatcgtaatgttcggaaaaat
ttttcaaaaattgtaaatgaaaattacgatgaaaattacgatttagttgaagatttagca
tcaatggaagagtatgatgattatgatcaagaattagataaacgttactaa
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