Candidatus Hepatoplasma scabrum: HPPSJP_1910
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Entry
HPPSJP_1910 CDS
T09843
Name
(GenBank) helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
hsg
Candidatus Hepatoplasma scabrum
Brite
KEGG Orthology (KO) [BR:
hsg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsg03019
]
HPPSJP_1910
03009 Ribosome biogenesis [BR:
hsg03009
]
HPPSJP_1910
Enzymes [BR:
hsg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPPSJP_1910
Messenger RNA biogenesis [BR:
hsg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPPSJP_1910
Ribosome biogenesis [BR:
hsg03009
]
Prokaryotic type
rRNA helicases
HPPSJP_1910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_19
SecA_DEAD
PhoH
Motif
Other DBs
NCBI-ProteinID:
BDV03470
LinkDB
All DBs
Position
complement(201217..202320)
Genome browser
AA seq
367 aa
AA seq
DB search
MKLELKENLNNYLKAEKFTDLLQVQKEVFPILLKNDDLFCQSPTGTGKTLAYLLPIINNL
DKSKNNVEAIIIVPTNELVQQLKNQLQKLNKYFNFDFFAITKNLDYEWEKRKYHKKSKII
VTTIEKIFALQNKSPIDYRELKYLIVDEIDMIYHFKQLDLIAKFVKNLRLKNKITYAFFS
ATLSGDLQNKIKKTFKINPKLIDLDNKLTKKVDIKLIKVIENDKLQVLKELLESNEINPY
FVIIFANKNEEVKKIYNFLNKNNFKDIRYFNSDLNPRKRKQVFNEAKNEKIIYLITTDLY
ARGIDFNHVSHIINYDLPIDLNYFKHRIGRTNRVNDLKGKIYLLFEAKDKQKIDLIKAKN
ENISFKN
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagaattgaaagaaaatttaaataattatttaaaggcagaaaaatttactgat
ttgttacaagtacaaaaagaagtatttccgattttgctaaaaaatgatgatcttttttgt
caatcaccgaccggaacaggaaaaacattagcgtatcttctaccgattatcaataattta
gataaaagtaaaaataatgttgaagcaattattatcgttccaaccaatgaacttgtacaa
caattaaaaaatcaattacaaaagctaaataaatattttaattttgatttttttgcaatt
accaaaaatcttgattatgaatgagaaaaaaggaaatatcacaaaaaaagcaaaataatt
gttacaacgattgaaaaaatttttgctttgcaaaataaatcaccaattgactatagagaa
ttaaaatatttaatagtagatgaaatcgatatgatttatcattttaaacaattagattta
attgcaaaatttgttaaaaatttaagattaaaaaacaaaattacctacgcctttttttca
gctacactttctggtgatttacaaaataaaattaaaaaaacatttaaaattaatcctaaa
ttaattgatttagataataaattaacaaaaaaagttgatatcaaattaattaaagttatc
gagaacgataaattacaagtattaaaagaattgttagaaagtaatgaaataaatccttat
tttgtgatcatttttgctaataaaaatgaagaagttaaaaaaatctataatttcttaaat
aaaaataattttaaagatattagatattttaattctgatttaaatccaagaaaaagaaaa
caagtttttaatgaagcaaaaaacgaaaaaattatttatctcattacaactgatttatat
gcaagaggaattgattttaatcatgttagtcacatcataaattatgatttaccgattgat
ttaaattattttaaacatcgaatcggaagaacaaatcgtgttaacgacttaaaaggaaaa
atttatcttttatttgaagcaaaagataaacaaaaaatcgatttaattaaagctaaaaat
gaaaatataagttttaaaaattaa
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