Candidatus Hepatoplasma scabrum: HPPSJP_2400
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Entry
HPPSJP_2400 CDS
T09843
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hsg
Candidatus Hepatoplasma scabrum
Pathway
hsg03030
DNA replication
hsg03430
Mismatch repair
hsg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPPSJP_2400 (dnaE)
03430 Mismatch repair
HPPSJP_2400 (dnaE)
03440 Homologous recombination
HPPSJP_2400 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsg03032
]
HPPSJP_2400 (dnaE)
03400 DNA repair and recombination proteins [BR:
hsg03400
]
HPPSJP_2400 (dnaE)
Enzymes [BR:
hsg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPPSJP_2400 (dnaE)
DNA replication proteins [BR:
hsg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPPSJP_2400 (dnaE)
DNA repair and recombination proteins [BR:
hsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPPSJP_2400 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
BDV03519
LinkDB
All DBs
Position
271571..274453
Genome browser
AA seq
960 aa
AA seq
DB search
MKQQQLNLNLITKSSFNFFTSLLKLEDIINFSLENNYQNACLVEKDTMYLIYPFIKDCVK
NNLKPIIGLEVSSLNVIFFAKNLSGYYKLVKISSIINTQSNFDIKKYLNEDDLIILSDYN
NLPQHLFKKNNQLESLEIFAKIGNKELPLNKDKLLKNEEFIKKYGSELLDKYQKIIKEIN
LIFDFKKNFKLPEFEIEDKFKNQDQYLYYLLENNLKNYLKVSKYANLHKKIYYERVNYEF
SIIKKTGFTNYFLIIFDLIKYARKMKIYVGPGRGSASGSIVSFLLNITLADPIKANLYFE
RFLNPERITFPDIDIDIEDERRDELFLYLRNKYGKDNFAQIITFQSLKAKMSLKDVFRFL
KISPSESNRITKLIDDKVDLNYSYNHNKNFKYAIEENLNYKKGYEIAKQIEGLPRQFSTH
AAGIVISHQKIIDLVPIQSGYSNEYNQTQYSMNYLEENQLLKMDLLGLKNLTFLKNILNL
IKQTEKKQIDLKKINYKDQNIFKLLSQGRTLGIFQLESAGMSDVLIKIEPTEFEDIVATI
SLFRPGPFKQIDHYVKRKHQKEEITYSVPELEEILKKTYGIIIYQEQIMEIAKKIANFSL
AKADLLRKAISKKNSAELESLKSDFIKGAIKNNFSLKIAEDIYNLIFEFASYGFNRSHAF
SYSFITYWLAYLKTYFPKQFITCLLNQAIGNDNKTIQYIEEAQFFKIKIRYPDINETNYD
YFLKDDQIFLALEVIKGLGKQIVNDLLNERKLGVYKDFTDFVVRSQKLRLSRKQLEFLIK
GGALDNFNLTRNTMLNNLNLILEYAKLVLVKKDNHYQIDYSILEEKPVIKNYQKDNYQQF
EKEALGFLLEANDFIKYQNKLNQKQRQNLLLIIQIENKQDLKIKTFGVINSIRKIKTKKL
QEMAFIEIKDSTDKISITIWPKDYKQLQTKLKIGIGIIIHGKIDLRRNRTIILEQAEFIE
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcaacaattaaatttaaatttaattacaaagtcttcttttaatttttttaca
tcacttttgaaattagaagatattattaatttttctttagaaaataattatcaaaatgct
tgtttagttgaaaaagatacaatgtatcttatttatccttttattaaagattgcgttaaa
aataatttaaaaccaataataggtcttgaagtaagttcattaaatgttatttttttcgct
aaaaatttatcaggatattataaattagtaaaaatttcttctattattaatactcaaagt
aattttgatattaaaaaatatctcaatgaagatgatttgataattttatcggattataat
aatttaccacaacatctttttaaaaaaaataatcaacttgaatcattagaaatttttgca
aaaataggaaataaagaactacctttaaataaagataaattattaaaaaatgaagaattt
attaaaaaatatggaagtgaacttttagataaatatcaaaaaataattaaagaaattaat
ttaatttttgattttaaaaagaattttaaattacctgaatttgaaattgaagataaattt
aaaaatcaagatcaatatctttattacttattagaaaataatttaaaaaattatttaaaa
gtgagtaaatatgcaaatttacataaaaagatttattatgagcgagttaattatgaattt
tcaataattaagaaaacaggttttacaaattattttctgattatttttgatttaataaaa
tatgcaaggaagatgaagatatatgttggcccaggaagaggatctgcttctggttcaatt
gtttcttttcttttaaatataacacttgctgatccgataaaagcaaatctttattttgaa
agatttttaaatccggagcgaattacttttcctgatattgatatcgatatcgaagatgaa
agaagagatgaattatttttgtatcttcgtaataaatatggaaaagataattttgcgcaa
attattacttttcaatcattaaaggcaaaaatgtcacttaaagatgtttttcggttttta
aaaatttcgccatcagaatcaaatcgtattactaaacttatagatgacaaagttgattta
aattattcttataatcataataaaaattttaaatatgcaattgaagagaatttaaattat
aaaaaaggatacgaaattgcaaaacaaattgaaggattaccaagacaattttcaacacat
gcggccggaattgtaatttcacatcaaaaaataattgatttagttccgattcaatcaggc
tatagtaatgaatataatcaaacacaatattcaatgaattatttagaagaaaatcaatta
ttgaagatggatcttttgggattaaaaaatcttacatttttaaaaaatattcttaattta
ataaagcaaacagaaaaaaaacaaatcgatcttaaaaaaattaattataaagatcaaaat
atttttaaattattatctcaaggaagaacattgggaatatttcaacttgaatcagcggga
atgagtgatgttttaattaaaattgaaccaactgaatttgaagatatcgtagcaacaata
tctttatttcgcccaggtccatttaaacaaatcgatcattatgtaaaaagaaaacatcaa
aaagaagaaattacttattctgttccagaattagaagaaattttaaaaaaaacgtatggg
attattatttatcaagaacaaattatggaaattgcaaaaaagattgcaaattttagtctt
gcaaaagctgatctcttgcgaaaagcaatttctaaaaaaaatagtgcagaattagaatca
ttgaaaagtgattttattaaaggggcgatcaaaaataatttttctttaaaaattgcagaa
gatatttataatctcatttttgagttcgcttcttatggatttaatagatcacatgcattt
tcatattcttttattacttattgattagcttatttaaaaacttattttcctaagcaattt
attacttgtttattaaatcaagcgatcggaaatgataataagacaattcaatatatcgaa
gaggcacaattttttaaaataaagattagatatccagatataaatgaaacaaattatgat
tattttttaaaagatgatcaaatttttcttgctcttgaagtgattaagggtttaggaaaa
caaattgtcaatgatcttttaaatgaacgaaaattaggtgtatataaagattttactgat
tttgttgttcgctcacaaaaattacgattatctcgaaaacagcttgaatttttaattaaa
ggaggagcattagataatttcaatttaacaagaaatacgatgcttaataatcttaattta
attttggagtatgcaaaattagtattagtaaaaaaagacaatcattatcaaattgattat
tcaattttagaagaaaaaccagttatcaaaaattatcaaaaggataattaccaacaattt
gaaaaagaggctttaggatttttattagaagcgaatgattttattaaatatcaaaataaa
ttaaatcaaaaacaaagacaaaatttattattaatcatacaaatagagaataagcaagat
ttaaagataaaaacatttggtgttattaattcaattcgtaaaattaagacgaaaaaacta
caagaaatggcttttattgagattaaagatagcactgataaaatttcaattacaatctgg
ccgaaagattataagcaattacaaacaaaattaaaaataggtatcggaattattattcat
ggtaagattgatttaagaagaaacagaacaataattttagaacaagcagagtttattgaa
taa
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