Candidatus Hepatoplasma scabrum: HPPSJP_2620
Help
Entry
HPPSJP_2620 CDS
T09843
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hsg
Candidatus Hepatoplasma scabrum
Pathway
hsg03030
DNA replication
hsg03430
Mismatch repair
hsg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPPSJP_2620
03430 Mismatch repair
HPPSJP_2620
03440 Homologous recombination
HPPSJP_2620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsg03032
]
HPPSJP_2620
03400 DNA repair and recombination proteins [BR:
hsg03400
]
HPPSJP_2620
Enzymes [BR:
hsg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPPSJP_2620
DNA replication proteins [BR:
hsg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPPSJP_2620
DNA repair and recombination proteins [BR:
hsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPPSJP_2620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delt_C
Rep_fac_C
Motif
Other DBs
NCBI-ProteinID:
BDV03541
LinkDB
All DBs
Position
complement(308371..309321)
Genome browser
AA seq
316 aa
AA seq
DB search
MKYIIQSESFFIKKEEVENIIKFANFKREQIFIFDYTENQFARAFDQYLSNSIFGEKKII
IINNCLFLEKKILDKKFIKKINILFNAKNDNFLIFKTNKLSKNNLFLNEFLKAKKINLIY
KQIPSKMEINKFLREKLKQDNLFFDSYKINKILGYVKYDYDILHNELKKISLLKDKSITN
DLDLIIYDYVGENIFKLYDSLLAKNISNLSKILNSLKTKNISPIMIIEYLIKELQYLLLI
KNYQNLKLKQKTSILDLNLNKYRLKKIIENANNYSYQYIEEIINKLIKSLILFKSNYSST
NYQLFIAKFILLSSQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatattattcaatcagagagtttttttattaaaaaagaagaagttgaaaatatt
attaaatttgctaattttaaaagagaacaaatttttatttttgattacactgaaaatcaa
tttgcaagagcttttgatcaatatttaagtaattctatttttggagaaaaaaaaattatt
attatcaataattgtttatttttggagaaaaaaattttagataaaaaatttatcaaaaaa
ataaatattttatttaatgcaaaaaatgataattttttaatttttaaaacaaataaattg
agcaaaaataatcttttcttaaatgaatttttaaaagcaaaaaaaattaatttaatctat
aaacaaattcctagtaaaatggaaattaataaatttttaagagaaaaattaaaacaagat
aatcttttttttgattcctataaaattaataaaatacttggatatgtaaaatatgattat
gatatcttacataatgaattaaaaaaaatttctttattaaaagataaaagcattacaaat
gatctcgatttaattatttatgattatgtaggtgaaaacatttttaaattatatgattcg
ttacttgcaaaaaatatttctaacttaagtaaaattttgaattctcttaaaactaaaaat
atatcaccaatcatgataatagaatacttaattaaggaattacaatatttacttttaatt
aaaaattatcaaaatttaaagctaaaacaaaaaacatcaattttagatttaaatttaaat
aaatatagactaaaaaaaatcatcgagaacgcaaataattatagttaccaatatattgaa
gaaattatcaataaattaattaaaagtctaattctttttaaatcaaactatagttcaaca
aattatcaattatttatcgctaaatttattcttctttcctctcaattataa
DBGET
integrated database retrieval system
