Helicobacter suis: NHP194022_01000
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Entry
NHP194022_01000 CDS
T07888
Symbol
priA
Name
(GenBank) Primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hsh
Helicobacter suis
Pathway
hsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NHP194022_01000 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsh03400
]
NHP194022_01000 (priA)
Enzymes [BR:
hsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NHP194022_01000 (priA)
DNA repair and recombination proteins [BR:
hsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NHP194022_01000 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_3primeBD
nSTAND3
ADDB_N
AAA_22
PhoH
AAA_7
AAA_19
Zn_ribbon_6
TrwB_AAD_bind
SLFN-g3_helicase
BscB_a-b
cobW
DUF1687
DUF87
UvrD-helicase
T2SSE
Motif
Other DBs
NCBI-ProteinID:
BCD50429
LinkDB
All DBs
Position
81984..83858
Genome browser
AA seq
624 aa
AA seq
DB search
MIDRFYSVAPLKHHLKPLTYKSQTPLAKGDLVQITLRKSRLKGVVLQECEKPPFDCVLAT
SELTYFNAHQMLLLEFIAKYYCCSPGLVASLFIPFNKNNPPSNPISIPFEINPLSFAQNQ
ALEALKPHKSALLFGNTGSGKTQIYIHLILEKLQKNQTVIVLVPEIALTSQTQKALIKTF
ANQVGLWHSKLNSKQKQELLKQLALGQIRVVVGTRSALFLPMPNLGLILIDEEHDQAYKA
SQAPYYNARDIALYLSSKMPIQVILGSATPHVRSYYLAKKNQTLVRLKGRFFNTSKEILF
EENKTTLSQNLLECLTKSLEKKEQSMIFLPTRASFKKLLCYSCGNGVQCPFCSVNMSLHL
KEKCMRCHYCQHQLEIPKVCPTCKQPTLAGKRIGTQQLKSELETQLPQARIGILDKDHTH
TALQIQNILDAFNRQELDILIGTQMLAKGHDYPKVNLAIILGLDEVLNNGSYRSLEDGVS
LMHQIAGRSARKEHGKVLIQTLNAAFLKRYIQDYEDFLKDELQTRMPHFPPFMRLAQIEF
RNKDALIAQENMQTSLKMLQTLLDQNKGVQVLGSGCARVAKIAGKYRYQILLSASSTLGL
HQVLHNLQEHAKGIFKIDVDPLDI
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcgtttttatagtgttgcgccacttaaacaccatctcaaaccccttacctat
aaaagccaaaccccactagcaaaaggcgatttagtacaaatcactttgcgtaaatcgcgc
ctaaagggtgttgtactgcaagaatgtgaaaaacccccttttgattgtgttttggccact
tcagaattaacttattttaacgcccaccaaatgctacttttagagtttatagccaaatat
tattgttgttcccccggtttagtcgcttctttattcattccttttaataaaaataacccg
ccgtctaatcctatttctatcccatttgagataaaccccttaagttttgcacaaaaccaa
gccttagaggcactcaaaccccataagagcgctttactctttggaaatacggggagtggg
aaaacccaaatttatatccatttgatcttagaaaaattacagaaaaaccaaactgttatt
gtattagtacctgaaatcgcgctcacttctcaaacccaaaaagcattgatcaagactttt
gccaatcaagtagggttgtggcacagcaaactaaatagtaaacaaaaacaagaattatta
aaacaattagcattaggacagataagagtagtggtgggtacgcgtagtgctttattttta
cccatgccaaatttagggcttattcttattgatgaagagcatgatcaagcctataaagct
agccaagctccctattataatgcccgcgatattgccctttatctttctagtaaaatgcct
atccaagtgattttaggctcagccacaccccatgtgcgtagctattatctagccaagaaa
aaccaaacacttgtgcgtttaaaagggcgtttttttaacacctcaaaagaaattcttttt
gaggaaaataaaacaacactgagccaaaatttactggagtgtctgacaaaaagtttagaa
aaaaaagaacaaagcatgatttttctacccacccgcgcttcttttaaaaaattgctttgt
tattcttgtggaaatggcgtacaatgccctttttgtagcgtgaatatgagtctgcacctt
aaagaaaaatgcatgcgttgtcattattgccaacaccaattagaaattccaaaagtttgc
cctacatgcaagcaacctactttggccggaaaaagaataggtacgcagcaacttaaaagc
gaattagaaacacagttgccccaagcgcgcattgggattttagataaagatcacacccac
acggctttacaaatccaaaatattttagacgcctttaaccgccaagaacttgatatttta
atcggaacacagatgttagccaaaggccatgattatcctaaagtaaatcttgccattatt
ttaggtttagatgaggtgcttaacaatgggagttatcgcagtttagaagatggggtgtct
ttaatgcaccaaattgctggccgtagtgcgcgcaaagaacatggaaaagttctgattcaa
acgcttaatgccgcgtttttaaaacgctatatccaagactatgaagattttttaaaagat
gagttacaaacacgcatgccccattttccccctttcatgcgtttagctcagattgaattt
agaaataaagatgccttaatcgcccaagagaacatgcagacaagtttaaaaatgctacaa
actcttttagatcaaaataaaggcgtacaagttttagggtctggctgtgcgcgcgtggct
aaaattgcgggcaaataccgctaccagattcttttaagcgcgtcttcaactttagggcta
caccaagttttacacaacctgcaagaacatgctaaaggtatttttaaaattgatgtagat
ccgctagatatttag
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