Helicobacter suis: NHP194022_03050
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Entry
NHP194022_03050 CDS
T07888
Name
(GenBank) hypothetical protein
Organism
hsh
Helicobacter suis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
BCD50634
LinkDB
All DBs
Position
288296..293389
Genome browser
AA seq
1697 aa
AA seq
DB search
MDTLDKVYLLEQVPTIKTKMQKKRIQAFIPLRDALHDLIQAELNPLSTDGELETKRKKLN
ALYDGFVKTFGYLNENKNRKDLKGDLYGFRVLGLERDFDKGINKAQAQAQGLSLRKPSAQ
KADIFFKRTLAPQKTFTINNAKEALMASVSQTGGLDLAFIAEHFVSQSIEKTLEELLEQK
LIFKSHLENSSYVLASDYLSGNVKQKLKEAKQAIEAGREDLIENVQALEAIIPVDIKAID
IALHLGTPWIPPTYYEQFLLEQVREHYRQAGKEGVFYKEYVEKCLCVAKTRGFHVNNTEE
LDFLGIRDKNHSDRIKMSGARLLECVLNNSPLEIKYPDPNKTDENGKPIMVVDEEQSTLA
QERATQLQEAFKEWIYADYDRRTHLEQIYNDTFNTNVLKSYDGSHVRLEGFNQNIELRAH
QKNAIFRAIQERVVCLDHQVGAGKTLVAIASCMEQKRMGLVNKSLIAVPNHLTKQWAQEF
YRAYPNANVLVVESEDFSPKQREQLYNQIANNAYDAVIIAHSQLEFLANPEQTITDMWAE
EEQALRDGNEYLRKLVRDGLLDKSAVMSVRAEEQAIKHIGVRYSKLLAENKSHIDISQMG
IDNLIVDEAHLFKNLGFSTNMQGVAGLGNKQGSKRATDLFVKTQYLHNRGAKIMFLTGTP
IANSIAELYHLQRYLQPEVLKDKGIDTFDDWAQTFGQIQADLELDTSAQNYKVVSRFSKF
NNVQELNTLYRSFADVISNIDIQKFNPHFVPPIEGGKPINIVVPRSEEVARFIGVQDESG
KFNEGSIVDRMEKCKGKKPEIGEDNILACTTDARKAALDYRLIDPNAKVQDAYSKSAAMA
VQIYEQYKEWDKDKGTQLVFISLSTPKVHSQRVQLEQSTQENTQENTPDSVQEFLESLTE
YNEQGQAITPSQQELESALAEQQAKALDLDTEVAKSASFDVYSDVLRKLVKLGIPQSEIA
FIHDAKTEAQKQELFRKVNAGEVRVLLGSPAKMGVGTNVQERLVAGHFLDCPWRPDELLQ
MEGRLIRQGNVLFERDPEHFTIKLFRYATEQTYDSRMWQIIETKSKSLEQFRNAHKLGLR
ELEDITMGSADAGQMKALATGNPLIVQEVQLRQTLRKEENLYKAFLKEQHFKQESLQRNK
STLQYTQERIGILNTLLELRESKKESVSIGLYDEAGQPQVFHLSKSDKSSKQSLERMEAI
FKACVQNALENEGTEIDVMNYRGLCFKAMRYHNKLEFYICHPDDSNCYIQPDNLSYSKDK
QDLLDAGSFADIDFKGFLRKCDNALERLDKEMLREQEHQEKAQQEIESLEALLDKTAEYP
KLTYLQALKEDHQELLKEIAKCSADRNYKSGFVAKSEQFASKAMQQDTQDNTIQDNTPEK
SEKEDTLASKEKLETRMQQEAAQHPSASRANRADNTIQENYLEEIKTMNAFLLEEEARLR
AELKREEPLYETWMQKAFNHQEAYWELWRQCSSMGFRIRKAEEGQEKILPQELKHLEQEY
ARLGQEASKHEQAFKEHVRFADMHYDEKRIEQSYPRGRYLKGLKSDHEAILAEIERTKED
PTYISTFRPEHSDNASWHAALHNCSDAERNKITQILEQAEQRQEIYKQERDNLLLGYEQN
SLTQAKTEKLAKLMFEIAEPKLFETYNVLFMHGGIMKQHLKETKRCIEEGKEALACLKEG
RQYRGLEQGSKRKIKGR
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
gtggataccttagataaagtttacctcttagaacaagtccccaccatcaaaacaaaaatg
caaaaaaagcgcatccaagctttcatccctctaagagatgcgctccatgacttaatccaa
gcagagctcaaccctttaagcaccgatggggagttagaaaccaagagaaaaaagctcaat
gctctctatgatgggtttgtgaaaacctttggctatttgaatgaaaacaaaaaccgcaaa
gaccttaaaggggacttgtatggctttagagtcttgggcttagaaagagactttgataag
ggcattaacaaagcccaagcacaggctcaaggcttatctcttagaaaacccagcgctcaa
aaagcagacatttttttcaagcgcaccctagcccctcaaaaaacattcacgatcaacaat
gccaaagaggctttaatggcgagtgtgagccaaacggggggattagatttagcctttatt
gctgagcattttgtaagtcaaagtatagagaaaacactagaggaacttttagagcaaaaa
ttgatttttaagagccatttagaaaactctagctatgtcttagccagtgattatttgagt
gggaatgtcaagcaaaagctcaaggaagccaaacaagccatagaggcaggcagagaggac
ttaatagaaaatgtccaagccctagaggctatcatccctgtagacatcaaggctatagac
attgctctgcatttaggcacgccttggattccccctacatactatgagcaattcctctta
gagcaggttagagagcattacagacaagcaggcaaagagggggttttttataaagagtat
gtagaaaagtgcctctgtgtggctaaaactagaggctttcatgtaaataacacagaagaa
ttagacttcttaggcattagagacaaaaaccattctgacagaataaaaatgagtggggcg
cgcttactagagtgtgtgttgaacaacagccctcttgagattaaataccccgaccccaat
aaaacagatgagaatggcaagcccattatggtcgtagatgaggaacaaagcaccctagct
caagagagagctacacaactccaagaagcctttaaagagtggatttatgcagactatgat
aggcgcacacatttagagcaaatctataatgacacctttaatactaatgtgcttaaaagc
tatgatggatcgcatgtgcgcttggagggctttaatcaaaatattgaacttagagcgcac
caaaagaatgctatctttagagccatccaagaaagggtagtttgtttagatcaccaagtg
ggcgcaggcaagactttagtagccattgcgagttgtatggagcaaaagcgtatgggtcta
gtcaataagagcttgattgctgtgcccaatcatttaaccaagcagtgggcacaagagttt
tatagagcctaccccaatgccaatgtcttagtggtggagagtgaggactttagccctaag
caacgcgagcaactctataaccagattgccaacaatgcatatgatgcagtcatcattgcc
catagccagttggagtttttggctaatcctgaacagactattacggatatgtgggctgag
gaggagcaggcattgcgcgatggcaatgaatatttgcgaaaactggtcagggacgggttg
ttagataaatctgctgtgatgagtgtgcgcgctgaagagcaggctatcaagcacataggg
gtgaggtattctaagttgttggcagaaaacaaaagccacatagacattagccagatgggc
attgacaatctgattgtggatgaagcccatctctttaagaatctaggctttagcactaat
atgcagggtgtggcaggactgggcaacaaacaaggctctaaacgcgccaccgatctcttt
gtcaagacccaatacctgcataacagaggggctaagatcatgtttttaactggcacaccc
attgctaatagcattgcagagctctaccatctacaaagatacttacagccagaggttctc
aaagacaagggcatagatacctttgatgactgggcacagacctttggacaaatccaagca
gatttagaactagacaccagcgcacagaattacaaggtggtgagccgtttttctaagttt
aataatgtgcaagagttgaacacactctataggagttttgccgatgtcattagcaatata
gacatccaaaagtttaatccccactttgtgccacccatagaggggggcaagcctatcaat
attgttgtgccaagaagtgaggaggtggcgcgctttattggggtgcaggatgagagtggc
aaattcaatgaaggcagcattgtagatcgcatggagaagtgcaagggcaaaaagccagag
ataggagaggacaatatcctagcttgcaccacagatgctagaaaagcagccctagattat
cgtttgattgatccaaatgcaaaagtgcaagatgcatactctaagagtgcagcgatggct
gtgcaaatctatgagcaatataaagagtgggataaggacaagggcacgcagttagtcttt
attagcttgtccacccctaaagtgcatagccaaagggtgcaattagagcagagcacccaa
gagaatactcaagagaataccccagatagcgtgcaagaatttttagagagtctaacagaa
tacaatgagcaggggcaagccatcacccctagccagcaggaattagagagtgcattagca
gaacaacaggcaaaagccctagatttagatacagaagtagctaagagtgcttcctttgat
gtctatagcgatgtgttaagaaaactggtcaaactgggcatccctcaaagtgaaatcgcc
tttatccacgatgccaagactgaggcacaaaagcaagaactttttagaaaagtcaatgct
ggggaggtgcgggtgttattaggcagtcctgccaagatgggagtgggcacaaatgtacaa
gaacgcttagtagcagggcattttttggattgtccttggagacctgatgagctcttacaa
atggaggggcgcttgattagacagggcaatgtgctctttgaaagagacccagaacacttc
actatcaaactctttagatacgccacagaacaaacctatgatagccgtatgtggcagatt
attgagactaaaagcaaaagtttagagcaatttagaaatgcccacaaactaggcttaaga
gaattagaggacatcacaatggggagtgcggatgctgggcagatgaaagccttagccaca
ggcaatcccttgatagtccaagaggtgcaattaagacaaactcttagaaaagaggagaat
ctctacaaggcttttttaaaagaacagcacttcaaacaagagagtttgcaaagaaacaaa
agcacattgcagtatacacaggagcgtataggtattctaaacactcttttagagcttaga
gagtccaagaaagaatctgtaagcattgggctttatgatgaggcaggccagccacaggtt
tttcatctctctaaatctgataagtcaagcaaacagagtttagagcgtatggaggcaatt
tttaaagcttgtgtgcaaaatgccctagaaaatgaaggtacagagatagatgtgatgaac
tataggggcttgtgttttaaagcgatgcgctatcacaacaagctggagttttacatttgc
caccctgatgattctaattgctatatccaaccagacaatctaagctacagcaaagacaaa
caagacttgctagatgcagggagttttgcagacatagactttaaaggcttcttgcgcaag
tgtgataatgccctagagagactagacaaagaaatgctcagagagcaagaacaccaagaa
aaggcacaacaagagattgaaagcttggaggcattgctagacaagacagcagaataccct
aagttaacctatctgcaagcccttaaagaggatcaccaagaacttttaaaagagattgct
aaatgcagtgcagatagaaattataaaagtgggtttgtggctaagtctgaacaatttgct
agtaaagcaatgcaacaggatacacaagacaatactatacaagacaataccccagagaag
tcagagaaagaggacactctagccagtaaagagaagttagaaacaaggatgcagcaagaa
gcagcccaacatcccagcgcatctagggcaaacagagcagacaacaccatacaagaaaat
tatttagaggaaattaaaactatgaatgcctttttgctagaagaagaggcgcgcttgaga
gctgaattaaagagagaagagccactttatgagacgtggatgcaaaaggcattcaatcac
caagaggcatattgggagctttggcgtcaatgtagttctatggggtttcgcataagaaaa
gcagaagaaggacaagaaaaaatcctgccacaagagttaaaacacttggagcaagaatac
gcacggcttggacaagaagcaagtaagcatgaacaagccttcaaagagcatgtgaggttt
gcagacatgcattatgatgagaaaagaattgagcaaagctacccacgaggacgctattta
aaaggtctcaagtctgatcatgaagccatcttggcagaaatagagcgcactaaagaagac
cccacctacattagcacctttagaccagaacattctgacaatgcgagctggcacgctgct
ctgcataattgttctgatgcagagcgcaacaaaataacacaaatcttagagcaggcagaa
cagcgccaagaaatctacaaacaagagcgggacaatcttttattgggctatgaacaaaat
tccctcacccaagctaaaacagagaaattagccaaattgatgtttgagattgcagagcct
aaactttttgaaacctacaatgttctttttatgcatggaggcatcatgaaacaacatctc
aaggagactaagcgctgcattgaggagggtaaggaggctttagcctgtcttaaggagggc
agacaatatagggggctagagcaaggaagcaagagaaaaataaaaggcagatga
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integrated database retrieval system
