Helicobacter suis: NHP194022_11980
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Entry
NHP194022_11980 CDS
T07888
Name
(GenBank) IS200/IS605 family element transposase accessory protein TnpB
KO
K07496
putative transposase
Organism
hsh
Helicobacter suis
Brite
KEGG Orthology (KO) [BR:
hsh00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
NHP194022_11980
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas12f1-like_TNB
HTH_OrfB_IS605
OrfB_IS605
VWD
Motif
Other DBs
NCBI-ProteinID:
BCD51527
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Position
1165338..1166600
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AA seq
420 aa
AA seq
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MQINKGFKYRLFPTKEQKALLKHHFFIYNQAYNICLNLQQEQYNTNKTLEKSQRQWSSSS
ALDTKIKYHLKQRDLSFSSVVAQQSRINAQKALKSALTLKDRGFPRFKNSKIAKQSFNWN
NQGYSIKDCNKRFKILRLMRQDFKVRWSRDLPKDCTIKQITFSCLNERYFVSFSVEYHRD
ITPLKTLSHQDKAIGLDLNIHDIALSDGTLIPTHSKTFNLAKYNLAFKRLQRKQSRRVLK
SKQTKTKLGRNFYKCQNSLNAIFTKSKHKKEDRYHKITSGLSNKFELVAVENLQVKNMTK
RAKLRNVKQKSGLNRSILNTSFYQIIKFLEYKQQHNGKLFVKVPPQYTSKTCHHCGNINR
QLKLNHREYCCPVCEYTEHRDINAAKNILRAGLKSLGLGISLADSKQQSLSSSETLVSVS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcaataagggttttaaataccgcttgttccctacaaaagagcaaaaggcttta
ctcaagcaccattttttcatttacaaccaagcctataatatctgcctaaacttgcaacaa
gagcaatacaacacgaataagaccctagagaaaagccaaagacaatggtcaagctctagt
gccttagacacaaagattaagtatcatcttaaacaaagagatttaagcttttctagtgtt
gtggcgcaacaaagccgtatcaacgcgcaaaaagctctcaaaagtgctttaaccctcaaa
gatagaggctttcccagatttaaaaactccaagattgctaaacagagctttaattggaat
aatcaaggttactccattaaagattgcaacaaacgctttaagattttaagactgatgcgc
caagattttaaagtgcgctggtctagggatttgcctaaagattgcaccattaaacaaatc
actttttcttgcctgaatgaacgctattttgtgagctttagcgtggaataccatagggac
atcacgcccttaaaaaccctaagccaccaagacaaagccataggtttagatttaaatatc
catgacatcgctttaagtgacgggactctcattcctacgcattctaagacatttaactta
gctaaatataatttagcctttaaaagactgcaaagaaaacagagtcgcagggttttaaag
tctaaacagaccaaaacaaaactagggaggaatttttacaaatgccaaaattctttgaat
gccatttttactaaatctaaacacaagaaggaagataggtatcacaaaatcacaagcgga
ctttctaacaagtttgaattggtagcagttgagaacttacaagtcaagaatatgaccaag
agagctaaacttaggaatgtgaaacaaaagagtggcttgaataggtctattcttaatacc
tcattctaccaaatcatcaaattcttagaatacaaacaacagcataatggcaaacttttt
gtgaaagtccctccgcaatacacgagcaaaacctgtcatcattgcgggaatatcaaccgc
caacttaagttaaatcatagagagtattgctgtcctgtatgtgaatacacagagcatagg
gacatcaatgccgctaagaatatcttaagagcggggttaaagtctcttgggttaggaatt
agccttgcagactctaaacagcaaagcctttcgagttcagaaaccctagtttctgttagt
tag
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