Helicobacter suis: NHP194022_12290
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Entry
NHP194022_12290 CDS
T07888
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase KdsA
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
hsh
Helicobacter suis
Pathway
hsh00541
Biosynthesis of various nucleotide sugars
hsh01100
Metabolic pathways
hsh01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
hsh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NHP194022_12290 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hsh01005
]
NHP194022_12290 (kdsA)
Enzymes [BR:
hsh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
NHP194022_12290 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
hsh01005
]
Lipid A
NHP194022_12290 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
BCD51558
LinkDB
All DBs
Position
complement(1193735..1194577)
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AA seq
280 aa
AA seq
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MAKCVLIAGPCVIEEMSVLESIANALKPLATDPRIDFYFKASFDKANRTSLESYRGPGLE
KGLLMLESIKNKFGYKLLTDIHESAQAGVVAEVVDVLQIPAFLCRQTDLIVAAAQTKRIL
NIKKGQFMHPKDMQYSALKALKTRAKNYKTPHYQACLEHGIYLCERGASFGYANLVVDMR
SLVIMRAFAPVIFDATHSVQMPGGAQGKSTGDSSFVPFLARASAAVGVDGFFMETHIDPK
NALSDGANMINTAHLQPLIEDLLALQSCPQHYLKDINGGI
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaatgcgtcttgattgctggtccttgtgtgattgaggaaatgtctgtgttagaa
tctattgccaatgctcttaaacctctagccacagaccctagaattgatttttatttcaag
gctagttttgataaggctaatcgcaccagtttagagagttatcgcggacccgggttagaa
aagggtttattaatgctagagagtattaaaaataaatttggctataaactcttaaccgat
attcatgaaagcgcgcaggcaggtgtagtagctgaagtagtagatgtattacaaatccca
gcatttttatgccgccaaactgatttaattgttgcagccgcacagactaaacggatttta
aatatcaaaaaagggcagtttatgcaccctaaggacatgcaatatagcgcgctgaaggca
ttaaaaacccgcgctaagaattataaaaccccccattaccaagcttgtttagaacatggg
atttatctttgtgagaggggggctagttttgggtatgctaatttggtggtggatatgcga
tcacttgtgattatgcgcgcctttgccccagtgatctttgatgcaacccatagcgtgcaa
atgccgggtggagcgcagggtaaaagtacgggggatagttcttttgtgccttttctagct
agggctagtgcagcagtgggggtagatgggttttttatggaaacccatatcgatcctaaa
aatgctttaagcgatggggctaatatgattaataccgcgcatttacaacctttgatagag
gatttattagccctgcaaagttgcccacaacattatttaaaggatattaatggcggaatt
taa
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