Helicobacter suis: NHP194022_12440
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Entry
NHP194022_12440 CDS
T07888
Symbol
gatB
Name
(GenBank) Aspartyl/glutamyl-tRNA amidotransferase subunit B GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
hsh
Helicobacter suis
Pathway
hsh00970
Aminoacyl-tRNA biosynthesis
hsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NHP194022_12440 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hsh03029
]
NHP194022_12440 (gatB)
Enzymes [BR:
hsh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
NHP194022_12440 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
NHP194022_12440 (gatB)
Mitochondrial biogenesis [BR:
hsh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
NHP194022_12440 (gatB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
DicA_C
MamY_C
Motif
Other DBs
NCBI-ProteinID:
BCD51573
LinkDB
All DBs
Position
complement(1205338..1206768)
Genome browser
AA seq
476 aa
AA seq
DB search
MFETIIGLEVHAQLNTKSKIFCSCPTSFKDAPNSNTCPVCLGLPGALPVLNIEAVRKAIA
FGTAIHATINQNSVFARKNYFYPDLPKAYQISQFELPIVSRGYLDIQTEAGAKRIAIERA
HLEEDAGKNIHSPQYSQVDLNRAGTPLLEIVSCPDMRSSSEAISYLKKLHSIVCFLDICD
GNMQEGNFRCDANVSIRPKGEEKLYTRVEIKNLNSFKFIQKAIDYEVARQIEAFERGTYE
KEVVQETRLFDTSKGITQSMRNKEGSADYRYFPDPDLKPLFIPVELMQEAQNIKELPEAK
KERYVKVLGLKAEEADILVSSLEMANYFEAMLEQGASAKGSFTWLSVELLGRLQGEQSLQ
DSPIESQVLAHLVRLIDSKHISGKAGKEILDTLMEQKVACVADIEQIIAKHNLAQMGDKE
VILKAIKTILEANPDKVKDYKGGKEKLLGFFVGQVLKNLKNANPAMVNSLLKEELA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaccattatcgggttagaagtacacgcccagcttaatactaagagtaaaata
ttttgctcctgccctactagttttaaagacgcccctaatagtaacacatgccccgtgtgt
ttagggctacccggagccctgcctgtgctcaatattgaggcagtaagaaaagccattgcc
tttggcacagccattcatgcaacaatcaatcaaaatagtgtttttgcccgtaaaaactat
ttttatcccgatctgcccaaagcctatcaaatttctcagtttgaattacccattgtgagt
cgcggatatttagacatacaaacagaagcgggagcaaagcgtattgctattgagagggcg
cacttagaagaagatgcggggaaaaatatccatagcccacagtattcacaagtggattta
aaccgcgcaggcacgccgcttttagagattgtgagttgcccggatatgcgcagtagtagc
gaggcaattagctatcttaaaaaattgcatagcattgtgtgctttttagatatttgtgat
ggcaatatgcaggagggtaattttagatgcgatgctaatgtctctatccgccccaaaggg
gaggagaaactctatacccgtgtagagattaaaaatctcaatagctttaaatttatccaa
aaggctattgattatgaggtagcacgccaaatagaggcctttgagcgcgggacttatgaa
aaagaagtggtgcaagaaacccgtttatttgatacaagtaaaggcatcacccaatccatg
cgcaataaagaaggttcagcagattatcgctattttcccgatccagatttaaagcccctt
tttatcccagtagaactgatgcaagaggcgcaaaatattaaagaactccctgaagctaaa
aaagagcgctatgtcaaagttttagggcttaaagctgaggaggctgatattttggtgagt
agtttagaaatggctaattattttgaggcgatgttagagcagggggctagcgctaagggg
agttttacttggctaagtgtggaacttttaggccgtttgcaaggcgagcagagtttgcaa
gatagccctatagaatcgcaagttttagcccatttagtgcgcctaattgatagtaagcat
atttcaggcaaggccggcaaagaaattttagatacactgatggagcaaaaggtagcttgt
gtggcagatattgagcagatcattgctaagcacaatctagcccaaatgggggataaagag
gtgattttaaaggctattaagacgattttagaggctaatccggataaggttaaggattat
aagggcggtaaagaaaaacttttagggttttttgttgggcaggtgcttaaaaatctgaaa
aacgctaatccggcgatggttaatagcttgttaaaagaggaattagcctaa
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