KEGG   Helicobacter suis: NHP194022_12650
Entry
NHP194022_12650   CDS       T07888                                 
Name
(GenBank) hypothetical protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hsh  Helicobacter suis
Pathway
hsh03030  DNA replication
hsh03430  Mismatch repair
hsh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hsh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NHP194022_12650
   03430 Mismatch repair
    NHP194022_12650
   03440 Homologous recombination
    NHP194022_12650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsh03032]
    NHP194022_12650
   03400 DNA repair and recombination proteins [BR:hsh03400]
    NHP194022_12650
Enzymes [BR:hsh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NHP194022_12650
DNA replication proteins [BR:hsh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NHP194022_12650
DNA repair and recombination proteins [BR:hsh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NHP194022_12650
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: BCD51594
LinkDB
Position
1229073..1229681
AA seq 202 aa
MGDHPLKPCFSEPYYQSLYCFIDIETTGSKPENSSMIEIAALLYEPPKNPMHKGQIIRSF
SSLIHCLEVPPKITELTGLSTDDLKEAPPLEAVLQDFKLFIQDHIFVAHNADFDFHFISA
CCVQVLDSALSNAKLCTLNLARKCIPSPRHGLQFLNTFLGLDIPISHRAYADALASLRVF
EHCLRVLPQEIYTAQDLLDYGT
NT seq 609 nt   +upstreamnt  +downstreamnt
atgggcgatcacccccttaaaccatgtttttcagagccttactaccaatcgctttattgc
tttatagacattgaaaccaccggatctaagcctgaaaactctagtatgattgaaattgct
gctttgctttatgaaccgcctaaaaatccaatgcataaggggcaaattatccggagtttt
tctagtctaatccactgcttagaagtccccccaaaaattacagaactcaccggccttagc
acagacgatcttaaagaagcgccccctttagaagctgtattacaagattttaaactcttc
attcaagatcatatttttgtcgcccacaatgcagattttgattttcattttattagtgca
tgttgtgtgcaagttttagatagcgccttgtctaatgccaaactttgcacgcttaattta
gctagaaaatgcattcctagccctagacacggccttcaatttctcaacacatttttaggg
ttagatattcctatttctcatagagcttatgccgatgcgctcgcctctttgcgcgtcttt
gaacattgcctgcgcgtactgccccaagaaatttatacagcccaagatctcttagattat
ggcacttaa

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