KEGG   Helicobacter suis: NHP194022_13570
Entry
NHP194022_13570   CDS       T07888                                 
Symbol
rny
Name
(GenBank) Ribonuclease Y Rny
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
hsh  Helicobacter suis
Pathway
hsh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hsh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NHP194022_13570 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsh03019]
    NHP194022_13570 (rny)
Messenger RNA biogenesis [BR:hsh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NHP194022_13570 (rny)
SSDB
Motif
Pfam: HD RNase_Y_N KH_1 HDOD KH_KhpA-B KH_PNO1_2nd KH_2
Other DBs
NCBI-ProteinID: BCD51686
LinkDB
Position
1316588..1318156
AA seq 522 aa
MERIFINSLLPCLLTGISVFWITKKSLTSKHRSLIKQAKAKADMLLYQAQVLYKTKEVES
ETLAHQLKQQYEEQIQTHNTSYQTRLNDLKSYEQQQQQHWNSKHKKLDQDKMALDDLKTQ
LQEEKRLQEQTCQEYNKLKQQALDTLMERSGYTQEEAQNMVLRLLEEELILQKGALVRRY
EKQAKKEAKERANFILAEATSRFASDFAVENLTSVVSLPSVEFIGRIIGKDGKNIEALKR
ISGVEIIIDEESKTITLSCFNLYRREIATQTLKLLIEDGRIQPARIETVYKRVEANMEEN
ILKQAEEIILDLQLDSMDQELKTLLGRMRYRTSYGQNALTHSIEVAILADTIAAQLGGDA
KLARRAGILHDIGKALTQEHGGDHVELGAEVCLRHGEHPVVINAIYAHHDRQEIKSIECA
AVCAADALSAARPGARRKEAENFLARMHDLERIASQKSGVEKVFAMDAGREVRVIVCPDK
INDAKITLLARDIAKEIQANLQYPGEVVVHVVRETHAKAIAR
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggaaagaatttttataaacagcttgctaccctgcttactcaccggcattagtgttttt
tggatcacaaaaaaatcgctgacttccaagcatcgatctctaatcaagcaggctaaggct
aaagcagatatgctgctttatcaagctcaagtactttataaaacaaaggaagtagaatca
gaaacactagcccaccaattaaaacaacagtatgaagaacaaattcaaacccataacact
tcctaccaaacaagactcaatgatctaaaatcttatgaacaacaacagcaacaacactgg
aatagcaaacataaaaagctagatcaagacaaaatggcgctagatgatctcaaaacacaa
ttacaggaggaaaaacgactccaagagcagacatgccaagaatataacaaactcaaacaa
caagccctagatactttaatggaacgatcgggttatacccaagaagaagcccaaaacatg
gttttgcgtctgttagaagaggagttaattttacaaaaaggggctttagtacgccgttat
gaaaaacaagccaagaaagaggctaaagagagggctaattttattttagcggaggccact
tccagatttgccagtgattttgcggtggaaaatttaaccagtgtggtttccttgcctagc
gttgaattcatcggccgcatcattggtaaagatgggaagaatattgaagctctcaagcgt
attagtggggtagaaatcatcattgatgaggaatctaaaaccattactttaagctgtttt
aatctttaccggcgcgaaattgccacccaaactttaaaacttttaattgaagatgggcgt
atccaaccggctcgtattgaaaccgtctataaacgggtagaggctaacatggaagaaaat
attttaaagcaagccgaagagatcattttagatttacaattagattctatggatcaagaa
ctcaaaacgcttttagggcgtatgcgctaccgcaccagttatggacaaaatgcattaacc
cactctattgaagtggccattttagccgataccattgccgcacaattaggaggcgatgcc
aaactagctagacgcgcaggtattttacatgacattggcaaggctctaacccaagaacat
ggaggcgatcatgtagaactaggcgcggaggtgtgtttaagacatggcgaacaccccgtt
gtgatcaatgcaatttatgcccaccacgatcgccaagaaattaaaagtattgaatgtgcg
gcggtgtgtgcagccgatgcgctttcagccgcgcgccccggagcaaggcgtaaagaggca
gagaactttttagcccgcatgcatgatttagagcgcatcgctagccaaaaaagcggtgta
gaaaaagtctttgcgatggatgcgggtagagaggtacgcgtaattgtttgtccggataaa
attaatgatgccaaaatcacgcttttagcccgcgatattgctaaggaaatccaagctaat
ttacaataccccggggaagtagttgtacatgtggttagagaaacccatgcaaaagccatt
gctagatag

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