Helicobacter suis: NHP194022_13570
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Entry
NHP194022_13570 CDS
T07888
Symbol
rny
Name
(GenBank) Ribonuclease Y Rny
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hsh
Helicobacter suis
Pathway
hsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NHP194022_13570 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsh03019
]
NHP194022_13570 (rny)
Messenger RNA biogenesis [BR:
hsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NHP194022_13570 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
KH_KhpA-B
KH_PNO1_2nd
KH_2
Motif
Other DBs
NCBI-ProteinID:
BCD51686
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All DBs
Position
1316588..1318156
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AA seq
522 aa
AA seq
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MERIFINSLLPCLLTGISVFWITKKSLTSKHRSLIKQAKAKADMLLYQAQVLYKTKEVES
ETLAHQLKQQYEEQIQTHNTSYQTRLNDLKSYEQQQQQHWNSKHKKLDQDKMALDDLKTQ
LQEEKRLQEQTCQEYNKLKQQALDTLMERSGYTQEEAQNMVLRLLEEELILQKGALVRRY
EKQAKKEAKERANFILAEATSRFASDFAVENLTSVVSLPSVEFIGRIIGKDGKNIEALKR
ISGVEIIIDEESKTITLSCFNLYRREIATQTLKLLIEDGRIQPARIETVYKRVEANMEEN
ILKQAEEIILDLQLDSMDQELKTLLGRMRYRTSYGQNALTHSIEVAILADTIAAQLGGDA
KLARRAGILHDIGKALTQEHGGDHVELGAEVCLRHGEHPVVINAIYAHHDRQEIKSIECA
AVCAADALSAARPGARRKEAENFLARMHDLERIASQKSGVEKVFAMDAGREVRVIVCPDK
INDAKITLLARDIAKEIQANLQYPGEVVVHVVRETHAKAIAR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaatttttataaacagcttgctaccctgcttactcaccggcattagtgttttt
tggatcacaaaaaaatcgctgacttccaagcatcgatctctaatcaagcaggctaaggct
aaagcagatatgctgctttatcaagctcaagtactttataaaacaaaggaagtagaatca
gaaacactagcccaccaattaaaacaacagtatgaagaacaaattcaaacccataacact
tcctaccaaacaagactcaatgatctaaaatcttatgaacaacaacagcaacaacactgg
aatagcaaacataaaaagctagatcaagacaaaatggcgctagatgatctcaaaacacaa
ttacaggaggaaaaacgactccaagagcagacatgccaagaatataacaaactcaaacaa
caagccctagatactttaatggaacgatcgggttatacccaagaagaagcccaaaacatg
gttttgcgtctgttagaagaggagttaattttacaaaaaggggctttagtacgccgttat
gaaaaacaagccaagaaagaggctaaagagagggctaattttattttagcggaggccact
tccagatttgccagtgattttgcggtggaaaatttaaccagtgtggtttccttgcctagc
gttgaattcatcggccgcatcattggtaaagatgggaagaatattgaagctctcaagcgt
attagtggggtagaaatcatcattgatgaggaatctaaaaccattactttaagctgtttt
aatctttaccggcgcgaaattgccacccaaactttaaaacttttaattgaagatgggcgt
atccaaccggctcgtattgaaaccgtctataaacgggtagaggctaacatggaagaaaat
attttaaagcaagccgaagagatcattttagatttacaattagattctatggatcaagaa
ctcaaaacgcttttagggcgtatgcgctaccgcaccagttatggacaaaatgcattaacc
cactctattgaagtggccattttagccgataccattgccgcacaattaggaggcgatgcc
aaactagctagacgcgcaggtattttacatgacattggcaaggctctaacccaagaacat
ggaggcgatcatgtagaactaggcgcggaggtgtgtttaagacatggcgaacaccccgtt
gtgatcaatgcaatttatgcccaccacgatcgccaagaaattaaaagtattgaatgtgcg
gcggtgtgtgcagccgatgcgctttcagccgcgcgccccggagcaaggcgtaaagaggca
gagaactttttagcccgcatgcatgatttagagcgcatcgctagccaaaaaagcggtgta
gaaaaagtctttgcgatggatgcgggtagagaggtacgcgtaattgtttgtccggataaa
attaatgatgccaaaatcacgcttttagcccgcgatattgctaaggaaatccaagctaat
ttacaataccccggggaagtagttgtacatgtggttagagaaacccatgcaaaagccatt
gctagatag
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