Helicobacter suis: NHP194022_15050
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Entry
NHP194022_15050 CDS
T07888
Symbol
topA
Name
(GenBank) DNA topoisomerase I TopA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hsh
Helicobacter suis
Brite
KEGG Orthology (KO) [BR:
hsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsh03032
]
NHP194022_15050 (topA)
03400 DNA repair and recombination proteins [BR:
hsh03400
]
NHP194022_15050 (topA)
Enzymes [BR:
hsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NHP194022_15050 (topA)
DNA replication proteins [BR:
hsh03032
]
Prokaryotic type
DNA Topoisomerases
NHP194022_15050 (topA)
DNA repair and recombination proteins [BR:
hsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NHP194022_15050 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
HVO_2753_ZBP
DNA_ligase_ZBD
O-FucT
ADK_lid
Zn_Ribbon_1
zf-C2HC_3
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
BCD51834
LinkDB
All DBs
Position
complement(1466518..1468809)
Genome browser
AA seq
763 aa
AA seq
DB search
MRRKSAKNLIIVESPMKAKTIAHFLDPNYQVIASKGHVRDLSKYAMGIHIEDEKFFPKYT
VSKDHEEIVSQILDLAKDASQIYIATDEDREGEAIGYHIAYLIQEKQEGAKKTSHSIKQE
ILDLETQTNSPKNNPIFALPRIVFHEVTKSAILHALAHPKTLDIDKINAQLARRLLDRIV
GFSLSSLLAHKISRGMSAGRVQSAALKIIVDREKEIQAFKPLTYYNIEAIFAHGIEASLE
SYQGTKIKKQSLTDVAKALEMVANLKDQVYHVQGISHKNKTSPTPPPFMTSTLQQSASTH
LGYNPSKTMGIAQKLYEGVATPDGISGVITYMRTDSLHIAKEAQQAAREFIQNTYGSPYL
PPTPKNYTSKNKSAQEAHEAIRPTQLSFTPDIAKDYLKPEEHKLYTLIYQRFLASQMSDA
IFEQQQILIGTPLEAVFKASGRKLIFDGYHRVLKDNSEDKLLPPLTLQESIALEKIQARE
YHTEPPARYSEASLIKTLESLGIGRPSTYAPTITLLLSRNYVQLKKKQLTPTENAFVVVG
ILEKYFTNIVDATFSASLEDKLDAIAGNKASWQQMLMDFYMPFMEQIEIGKAQIASQKVS
IPTGEFCPKCGSELVQRKGRFGVFVACSGYPKCKFIQLTSKDSENIEPCEKCGSAMVVKK
GRFGEFLACSNYPTCKNIRSQTPKEQGSAYPCPQCQGQVVQKRSKRGVFYGCNNYPTCTF
LTNYKPIEKPCPQCGSLMVLKAYKKKPSLHNCLKCDFTEPADA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaaagtctgctaaaaatctcattatcgtagaatcccccatgaaagctaaaaca
atcgcgcattttcttgatcctaattaccaagttattgcctccaaaggacatgtgcgcgat
ctaagcaaatatgctatggggattcatattgaagatgagaagtttttccctaagtacacg
gtgagtaaagatcatgaagaaattgtgagccagattttagatttagccaaagatgcctca
caaatttatatcgctacagatgaagaccgcgaaggggaggccattggttatcacattgcc
tatctgatccaagaaaaacaagagggggctaaaaaaacctctcattctataaaacaagaa
atcttagatttagaaacacaaacaaatagccccaaaaacaaccctatttttgccctcccc
cgtattgttttccacgaagttaccaaatcagctattttgcacgccctagcgcaccccaaa
actttagatattgataaaattaacgcccaactagccagaagacttttagatcgcatcgta
ggttttagtttaagttctttgttagcccataaaatttcgcggggcatgagtgcagggcgc
gtacaaagcgcagccttaaaaattattgtggatcgtgaaaaagaaatccaagcgtttaaa
ccccttacttattacaatattgaggctatctttgcccatgggatagaagcgagtttagaa
agttatcagggtactaaaattaaaaagcaaagtttaactgatgttgcaaaagccttagaa
atggtagctaatttaaaggatcaagtttaccatgtccaaggaattagccataaaaataaa
acctctcctaccccgcctccctttatgacttctaccttgcaacaaagcgcctctacccat
ttgggttataacccctctaaaactatgggcattgcccaaaagctttatgagggtgtggct
actcctgatggaattagcggggtaattacttatatgcgcacggatagtttacacatcgct
aaagaagcccagcaagctgccagagaatttatccaaaacacctatggtagcccttatttg
ccacccactcccaaaaattatacttctaagaataaaagcgcccaagaagcccatgaagct
atccgccccacacagttaagctttacccctgatattgccaaagattatctcaaaccagaa
gaacacaaactttatacccttatttaccaacgctttttagcttctcaaatgagtgatgcc
atctttgaacaacaacagattttaattggtacaccgctagaggctgtgtttaaagccagt
gggcgtaaattgatctttgatggctatcatagagttcttaaagataacagcgaggataaa
ctcctcccgcccttaacccttcaagaatccatcgccttagaaaaaatacaagcccgcgaa
taccacacagaaccccctgctagatattctgaagcctctttaattaaaactttagaaagt
ttaggcattggtagacctagcacctatgcccccactattaccctcttactaagccgcaac
tatgtacagctcaagaaaaaacaactaacccccactgaaaacgcctttgtagttgttggc
attttagaaaaatattttaccaatattgtagatgccacttttagcgctagtttagaggat
aaattagatgccattgccggcaataaagcctcttggcaacaaatgctcatggatttttac
atgccttttatggaacaaatagaaattggaaaagcccaaattgcctcccagaaagtcagt
atccccaccggagagttttgcccaaaatgtggttcagaattagtgcaaagaaaaggtaga
tttggggtttttgttgcttgtagtggttatcctaagtgtaaatttatccaactcacctct
aaagactctgaaaatatagaaccttgtgaaaaatgcggatctgctatggtggttaaaaaa
gggcgttttggagaatttctagcctgtagtaattaccccacctgtaaaaatatccgctca
caaacccccaaagaacagggctctgcctatccatgcccgcagtgtcaggggcaggtggtg
caaaaaagaagcaagaggggggttttttatggctgtaataattaccccacctgtactttt
ctaaccaattataaacccatagaaaaaccatgcccgcagtgtggttctttaatggtctta
aaagcttataagaaaaaacctagccttcataattgcttaaaatgtgattttacagagcca
gcagatgcctaa
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