Halobacillus shinanisalinarum: MUO14_08620
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Entry
MUO14_08620 CDS
T09504
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hshi
Halobacillus shinanisalinarum
Pathway
hshi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hshi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUO14_08620 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hshi03021
]
MUO14_08620 (rho)
03019 Messenger RNA biogenesis [BR:
hshi03019
]
MUO14_08620 (rho)
Transcription machinery [BR:
hshi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MUO14_08620 (rho)
Messenger RNA biogenesis [BR:
hshi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MUO14_08620 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_22
AAA_24
Spore_III_AA
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
UOQ94973
UniProt:
A0ABY4H3H2
LinkDB
All DBs
Position
complement(1729815..1731110)
Genome browser
AA seq
431 aa
AA seq
DB search
MAELTISNLEDMTLKKLYSLAKQYKVSYYAKLTKRELIFAILKAQAEKDGFLFMDGILEI
IPSEGFGFLRPINYSPSAEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVDA
VNGEDPDSAKERVHFPALTPLYPDRHMKLETESKKLSTRIMDLMAPVGYGQRGLIVAPPK
AGKTMLLKQMANSISTNHPDSKLIILLVDERPEEVTDIERSVAPDVDVVSSTFDEVPENH
IKVAELVLERAMRLVEHKRDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKR
FFGAARNIEEGGSFTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAID
IKRSGTRKEELLLPKAELDKVWAIRKALTDSHDFTDRFLRRLRSSKTNEEFFDLMDKDMN
MKGKAAQGRRS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaactaacgatatccaatttagaagacatgaccttaaagaaactctactctttg
gcgaaacagtacaaagtttcctattatgctaagctaacaaagcgagagttgatttttgcg
attttaaaagcacaggcagagaaagatggctttctatttatggatggtattttagaaatc
attccttccgagggctttgggttccttcgtccaattaattattcaccaagtgctgaagat
atttatatttccgcttcgcaaattcgcagatttgatttgcgaaatggtgataaagtcagt
gggaaagtacgtccacccaaagaaaatgaacgctattacggcttgcttcacgtagatgct
gttaatggtgaagaccctgattcagcgaaggaacgtgttcattttcctgcattaacccca
ctctatccagatcgtcacatgaagcttgaaacagaaagcaagaagctttccactcgaatt
atggacttgatggcaccggttgggtatgggcagcgtggattaattgttgctccacctaaa
gcgggaaaaacgatgctgcttaagcaaatggccaacagtatttcaaccaatcaccctgat
tcgaagttgattatattactcgttgatgagcgtccagaggaagtgaccgatattgaacgc
tccgtagcgccagatgttgatgttgtcagctcaacctttgacgaagtaccggaaaaccat
attaaagtggccgaactagtccttgagcgggccatgcgtctcgttgaacataagcgtgac
gtcattatcttaatggatagcatcacacggcttgcccgtgcgtacaacttggttattccg
ccgagcggccgtacactttccggggggatcgatccggcagcttttcaccgtccaaagcgg
ttcttcggcgcggctcgaaatattgaagagggcggcagctttaccattttggcaacagca
cttgtggacacaggttcacgtatggacgatgtgatttatgaagaatttaaaggaacaggg
aatatggagctgcatcttgatcgcagcctagccgagcgccgcattttcccagccatcgat
attaagcgttcgggaacgagaaaagaagagctcctcttaccgaaagccgagcttgataaa
gtgtgggcaatccgtaaagcacttactgattcccatgactttaccgaccgcttcctgcgc
agactgcgttcatcgaaaacgaacgaagagtttttcgatctaatggacaaggatatgaat
atgaaggggaaagcagcacaaggccgtcgcagctaa
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