Halobacillus shinanisalinarum: MUO14_08660
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Entry
MUO14_08660 CDS
T09504
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
hshi
Halobacillus shinanisalinarum
Pathway
hshi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hshi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MUO14_08660 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hshi03021
]
MUO14_08660 (rpoE)
03400 DNA repair and recombination proteins [BR:
hshi03400
]
MUO14_08660 (rpoE)
Transcription machinery [BR:
hshi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MUO14_08660 (rpoE)
DNA repair and recombination proteins [BR:
hshi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MUO14_08660 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARE-HTH
GH123_N
BUD22
Motif
Other DBs
NCBI-ProteinID:
UOQ94981
UniProt:
A0ABY4H3V4
LinkDB
All DBs
Position
complement(1739486..1740043)
Genome browser
AA seq
185 aa
AA seq
DB search
MSVKELSKQQVEEISMIELATMILKDKGEAIDFNDIFERIASLKGFNEKQKEEYIAQFYT
DLNVDGQFMTIGTNRWGLRSWYSVEQMEDEIANLPQKRKKKKKKKKKPSKLLEDELGESG
YDDSSDDDLEEDIDLTDEDLDLGDDDEDDYEGDYEEDDLDEEEEEIVEDDVSFVGDEDEK
DESKG
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtaaaggaactgagtaaacagcaggtagaggaaatatcaatgattgaactagca
actatgattcttaaggataagggagaagcgatcgattttaacgatattttcgaacgtatt
gcttcattaaaagggttcaatgagaaacagaaggaagaatacattgcccagttctataca
gatttaaatgtagacggtcaattcatgacaattggaacaaatagatgggggctaagaagc
tggtattctgtagagcaaatggaagatgaaattgccaaccttccccaaaaacgtaaaaag
aaaaagaagaagaaaaagaaaccatctaaattacttgaggatgaattaggtgagtctggt
tacgatgatagcagtgatgatgacttggaagaggatatcgatttgactgatgaggacctt
gaccttggtgatgacgatgaagatgattacgaaggtgactatgaagaggacgacctagac
gaagaggaagaagaaatcgttgaagatgacgtcagcttcgttggtgatgaagacgagaaa
gatgaatccaaaggttga
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