Halobacillus shinanisalinarum: MUO14_10115
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Entry
MUO14_10115 CDS
T09504
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
hshi
Halobacillus shinanisalinarum
Pathway
hshi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hshi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MUO14_10115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hshi03000
]
MUO14_10115
Transcription factors [BR:
hshi03000
]
Prokaryotic type
Helix-turn-helix
Other families
MUO14_10115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
HTH_3
HTH_19
HTH_31
TPR_2
RapH_N
TPR_8
TPR_1
SNAP
ARM_TT21_5th
RhoGAP-FF1
ANAPC5
ARM_TT21
Motif
Other DBs
NCBI-ProteinID:
UOQ95245
UniProt:
A0ABY4H460
LinkDB
All DBs
Position
2046946..2048226
Genome browser
AA seq
426 aa
AA seq
DB search
MEYGKVLRFHRVKQGLTQNQLAEGIISSAYLSKIENDQTVPAVEVLELLYERLGLDYNDS
SYSHPSKEKLKEWYESIVFKRRENAELLKEELLQQKETLANHQLYIFFELFRIRHLLLEN
EVKKAYEAWENIRQHKDTFDDEMKFYYHLVSGLVKYYKNEFNDAFQQLMEAKNYSSSFEI
EGWEKSDLFYLLALSTSQATHLSASVFYADQALEIFQTQYDLAKSADCHIIQGINYSRLK
NYTKSLENYHLARKIASQTNNNIQLTLVYINIGTLEARMGNHAIAIESYQKSIEYNDLST
SFRNSYLLTAVHSLVIEHYKKDDYEGCLKWVNYGEEKLKIYPSKPFQLHFEFYKKVINND
NNISDFLETDVIPFFEKKKEHIYIIRYSMFLADLLEKQRMYKKASFYLRLAIQLLNKHSQ
LGGILL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggaatatggtaaagtgcttcggtttcatcgagttaaacaaggtttgactcaaaaccag
ctagctgaggggattatttcgtcagcttacctctctaagattgagaacgatcaaaccgtt
ccagctgtagaggtgcttgagttgctttacgaaaggctcggtctcgactataacgattcc
tcttacagccatccttctaaggaaaagctaaaggaatggtatgaatcgatcgtgttcaaa
cgtagggaaaatgccgagttgttgaaggaagaattgctccagcaaaaggaaacgctggcc
aatcatcaattgtatatttttttcgagttgtttcgcattcgacatctattattggaaaat
gaggtgaagaaggcctatgaagcttgggaaaatatccgtcagcataaggatacttttgat
gatgagatgaagttctattaccatttggtttcgggtttggtgaagtattataaaaatgag
tttaatgacgccttccaacaattaatggaggctaaaaactatagttcttcatttgagata
gaaggttgggaaaaaagcgacctattttacttgcttgctttgagcacaagccaagcaacc
catttatcagcctctgtattttatgccgatcaagcacttgaaatcttccaaactcaatat
gatttagctaaaagtgctgattgccacattattcaagggataaattatagtcgtttaaag
aattacaccaaatctcttgaaaactatcatcttgcacggaaaattgcctcacaaaccaat
aacaatatacaactaactcttgtttacatcaatattggtacattagaagctcgtatgggt
aatcatgcgatcgctattgaaagttaccaaaaaagtattgaatataatgatttaagtaca
tcatttcgaaattcttatttactaactgctgttcatagcttagtaattgagcattataag
aaagatgactatgaaggatgtcttaaatgggttaactacggagaagagaagcttaaaata
tacccttcaaaaccctttcaacttcactttgaattttataaaaaagttataaacaatgat
aataatataagtgattttttggaaaccgatgtaatacctttctttgaaaagaagaaggaa
cacatatatatcatccgctattcgatgttcctagccgatctattggaaaaacaacggatg
tataaaaaggcttcattttacctaaggttagcaattcaattgttaaataaacattctcaa
ttaggagggatattattgtga
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