Halobacillus shinanisalinarum: MUO14_14750
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Entry
MUO14_14750 CDS
T09504
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hshi
Halobacillus shinanisalinarum
Pathway
hshi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hshi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUO14_14750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hshi03019
]
MUO14_14750
03009 Ribosome biogenesis [BR:
hshi03009
]
MUO14_14750
Enzymes [BR:
hshi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MUO14_14750
Messenger RNA biogenesis [BR:
hshi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUO14_14750
Ribosome biogenesis [BR:
hshi03009
]
Prokaryotic type
rRNA helicases
MUO14_14750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
UOQ91794
LinkDB
All DBs
Position
2932861..2934339
Genome browser
AA seq
492 aa
AA seq
DB search
MTTFNSLGLSNPVLKALNHMGFEETTPIQEQTIPLGLQGKDVIGQAQTGTGKTAAFGIPM
IEKINKDVKSVQGLVIAPTRELAIQVAEEVHRLGKNKGIRTLPIYGGSNMERQIRALKDN
HIVVATPGRLLDHIRRKTIKLENVHTAVLDEADEMLNMGFIDDIRDILKALPEERQTLLF
SATMPKEIRNIATTLMKNPEEVKVKSKEMTVENIEQYYVEIPEKHKFDTLTRLLDIHAPA
LAIVFGRTKRRVDEVSDGLQARGFRAEGIHGDLTQGKRMSVLNKFKKGRIEILVATDVAA
RGLDISEVSHVYNFDIPQDPESYVHRIGRTGRAGRKGESVSFVTSREKAQLNLIEKLTKK
KVERMSVPSSDEARRGQQQVAVDKMTESANNEDLNKYKQSANELLEQHDASDLVAAALKM
LTKERSEVPVRLSSVQPISVKGAQRSGGGKGGKKPYRKDGKRNFNKHNNKSRNFKGKGNR
GFQNKGRNSNAK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacattcaattcattaggattatctaatccggtgttaaaagctttaaaccatatg
ggttttgaagaaacaacaccgattcaagagcaaacaatccctctcggtttacaagggaaa
gacgtcatcggccaagcgcaaacgggaacaggtaagacagcagcatttggaattccgatg
atcgaaaaaattaataaagatgtcaagtctgttcaaggattggtcattgcaccaacgcgt
gaattggctatccaagtagctgaagaagtgcaccgtctcggtaaaaataaagggatacgc
acgctgccgatttatggtggatcgaatatggaacgtcaaattcgtgcactaaaagataac
catatcgttgtagcaacccctggacgtttacttgatcatatccgtcgtaaaacgattaag
ctggagaacgttcataccgcagtattagatgaagcggatgaaatgctaaacatgggcttc
atcgatgatattcgtgatattcttaaggcgcttccagaagagcgtcagacgttattgttc
tcagcgactatgcctaaggaaatccgtaatattgcaacaacacttatgaaaaaccctgaa
gaggttaaagtgaaatcgaaagaaatgactgtcgaaaatatcgagcagtattatgttgag
attccggaaaaacataagttcgatacactaacacgtcttcttgatatacacgcacctgca
ttggcgatcgtattcggacggacaaagcgccgtgtcgacgaagtttcagatggcttgcaa
gcccgcggtttccgtgctgaaggaattcatggtgatttgacacaaggaaaacgtatgtcc
gtgctaaacaagtttaaaaaaggacgtattgaaattcttgtagcgacagatgtggctgca
cgcggactagatatttctgaggtatcccacgtatataactttgatattccacaggatcct
gaaagctatgttcaccgtattggacgtacaggtcgtgctggacgcaaaggcgaatctgtc
tcctttgtcacttcacgtgaaaaagcacagcttaacttaattgaaaagcttacgaagaaa
aaggttgaacgtatgagtgtgccatcttctgatgaagcgcgccgcggacaacaacaagtg
gctgttgataagatgaccgaatccgctaataatgaggatttaaacaagtataagcaatcg
gcaaatgaactgcttgaacagcatgatgcctctgaccttgttgctgcagcattgaagatg
cttacaaaagaacgcagtgaggttcctgttcgactttcttctgtacagccgatcagtgtt
aaaggtgcacagcgcagtggtgggggtaaaggtggtaaaaaaccttaccgtaaagacggc
aagcgaaattttaataaacacaacaataagtcccgtaatttcaaaggtaaaggaaatcgc
ggcttccaaaacaaagggcgtaactctaacgctaaataa
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