Halobacillus shinanisalinarum: MUO14_19945
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Entry
MUO14_19945 CDS
T09504
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hshi
Halobacillus shinanisalinarum
Pathway
hshi03420
Nucleotide excision repair
hshi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hshi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MUO14_19945
03430 Mismatch repair
MUO14_19945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hshi03400
]
MUO14_19945
Enzymes [BR:
hshi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUO14_19945
DNA repair and recombination proteins [BR:
hshi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MUO14_19945
MMR (mismatch excision repair)
Other MMR factors
MUO14_19945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Viral_helicase1
UvrD_C_2
DEAD
AAA_30
SLFN-g3_helicase
ResIII
nSTAND3
NACHT
AAA_14
Motif
Other DBs
NCBI-ProteinID:
UOQ92667
LinkDB
All DBs
Position
4023737..4026004
Genome browser
AA seq
755 aa
AA seq
DB search
MSVYDEHLESEKERLTFTKEYMNHLITVQESGQKALKERQEDTLARLDFKDSSLRYQEML
THSSFMKLSKDQLENLKNLRKKPYFARIDFHRKEKTDKETFYIGKVSLFDRETQLPIILD
WRSPLANVYYEGRLGDVSYEAHGEVYEGNVSLKRQYQIEDGELLGFRDVDLTTKDELLQD
SLAQNAEHRLTEIVSTIQEEQNRVIRADLRKPIIVQGAAGSGKTTIALHRISYFLYNMRD
IFKPDEMLILAPNRLFIQYISEVLPELGVNRAKQTTFSDFVQHIIQVDWPVVSQHDVLMG
TIEKAEEGETRHLQMAGYKGSKAFKQLLDRYIQKVKQTYIVEEDFMLAEFKIKSGANIKR
LFLKDFQHFPYEVRVEKIKRVLQSELRRKKKQIIEKVAAKYDDELDKALFGMKDKDKRKT
RVSFLITRKEERLNELKKQARTAVSRYMKQFPKHKLTNLYKSMYEEEMFCSLVEEDSTEL
QYLRKTTSKYLQNKQLHSEDLAPLLYMYTYISGLHADDQVKKVVVDEAQDYSFLEFYSLK
KAFQTDLFTIVGDLAQGIYRYRGLQNWESLKEVFRQPSYLTLQKTYRTTIEIMNLANQLL
TLMPEDLPKAEPVVRHGPLPAFIEKQPGWKRAFIKVMDQLEDKGMNSFAIVTKTMKEAAE
VSQISEISSLNFQTLDEHTEMGDRMILPAYLAKGLEFDVVFLYSEDHPFTKNELDIKVLY
VAMTRPLHELYMIGNSPHDFLLDHLGQASYQVHSF
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgtatgatgagcatttagagagtgaaaaggaaaggttaacttttacaaaggag
tacatgaaccacttaatcactgtgcaggaatcaggtcaaaaggctttaaaagagcgacag
gaagacacgctggccagactggattttaaggatagcagtcttcgctatcaggaaatgctt
acacattcaagcttcatgaaactttctaaagaccagttagagaacctcaagaatctacgt
aagaaaccgtattttgcccgcatcgactttcaccgtaaagaaaagacagacaaagaaacc
ttttacattggaaaagtatctttatttgaccgtgaaactcaattaccgattatcttagat
tggcgctcacctctagcaaacgtctattatgaaggacgcttaggagacgtgagctatgaa
gcacatggagaggtgtatgaaggtaatgtttccttaaagcggcaatatcagattgaggac
ggagaactgcttggctttcgagatgttgatttaacgacaaaggatgagctgcttcaggat
tcgctcgcccaaaatgctgaacaccgtttaactgagattgtttcaaccattcaagaagaa
caaaatagagtcatacgtgctgatttgagaaagccaatcattgttcagggcgcggcagga
agtggaaagacaacgattgccttacaccgaatttcctactttttatacaacatgcgtgat
attttcaaaccagatgaaatgctgatcttagcccctaaccgcttgttcattcagtacata
tctgaggtgcttccagagctcggtgtaaatagagctaaacaaacgaccttctctgatttt
gtccaacacattatccaagtggattggccagtagttagtcagcatgatgtgttaatgggg
accattgaaaaagcagaagaaggagaaacacgtcatttgcaaatggctggatacaagggt
tcgaaggcttttaaacagctgcttgaccgctatatacaaaaagtaaaacaaacatacatt
gtggaagaagattttatgctagcagaatttaagattaagagtggcgcgaatattaagcgc
ctgtttcttaaggattttcagcatttcccatatgaagtacgtgttgaaaaaataaaacgc
gtattgcaaagtgaattgcgacgtaagaagaagcaaatcattgaaaaagtagctgctaaa
tatgatgacgaattagataaagcgctgtttggtatgaaggataaagataaacgtaaaaca
cgtgtcagtttcttaattactcgaaaagaagaaagacttaacgaattgaagaaacaggct
cgcacagccgtctcacgctatatgaagcaattccctaagcataagctgacaaatttatat
aagtccatgtatgaagaggaaatgttttgttccttggtagaagaggattcgacagagctt
cagtaccttcgcaagaccacaagcaagtatttacaaaacaagcagctccactcggaagat
cttgctccattgttatacatgtacacttatataagtggattacatgctgatgatcaggtg
aagaaggtcgttgtagatgaagcccaggattatagtttcctggaattttatagtttgaaa
aaagcctttcaaactgatttatttacgattgtaggtgacctcgcccaggggatttatcgc
tatcgaggactgcaaaattgggaatctttaaaagaagtgtttcggcagcctagctactta
accttacaaaaaacctaccgaacgacgattgaaatcatgaacttggccaaccaattatta
actctaatgccggaagaccttccaaaagctgaacctgtagtgaggcatggtccgctccct
gcatttattgaaaaacaaccaggttggaagagagcgtttattaaggttatggatcagttg
gaagacaaaggaatgaacagctttgctatcgtgacaaaaacgatgaaagaagctgctgaa
gtcagtcagatctctgaaattagttcgctaaactttcaaacgcttgatgagcatacggaa
atgggcgatcgaatgatactgcctgcctacttagcaaaaggactggaatttgatgtagtc
tttctctatagtgaggaccatccttttacaaaaaatgagctggacataaaggtgctctat
gtggccatgacaagaccgcttcacgagttatatatgattgggaatagcccacacgacttt
ttactagatcatttaggacaagcatcctatcaagttcattctttctga
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