Halobacillus shinanisalinarum: MUO14_22980
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Entry
MUO14_22980 CDS
T09504
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hshi
Halobacillus shinanisalinarum
Brite
KEGG Orthology (KO) [BR:
hshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hshi03032
]
MUO14_22980 (topA)
03400 DNA repair and recombination proteins [BR:
hshi03400
]
MUO14_22980 (topA)
Enzymes [BR:
hshi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MUO14_22980 (topA)
DNA replication proteins [BR:
hshi03032
]
Prokaryotic type
DNA Topoisomerases
MUO14_22980 (topA)
DNA repair and recombination proteins [BR:
hshi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MUO14_22980 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
RNA_POL_M_15KD
Toprim_4
Toprim_3
DUF2740
HypA
DNA_RNApol_7kD
Motif
Other DBs
NCBI-ProteinID:
UOQ93210
LinkDB
All DBs
Position
4635541..4637616
Genome browser
AA seq
691 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVKASLGHVRDLPRSQMGVNVEEEFEPKYITIRGK
GPVLKDLKAAAKKAKRVYLAADPDREGEAIAWHLAHSLDIDEQSKCRVVFNEITKEAIKD
SFKQPRTIDSDLVDAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSVAVKIIIDREN
EIKKFKPEEYWTIEADFLKEKETFEGSFYGVDGKKKELKTKEDVEEVKSKLKGDSYSVDK
VNKRERRRNPSLPFTTSSLQQEAARKLNFRAKKTMMIAQQLYEGIDLGGKQGTAGLITYM
RTDSTRLSNTAKEEAKNYIESTYGKEYLGKSKATKKQEGAQDAHEAIRPTSAARDPKSMK
KTLSRDQHRLYKLIWDRFLASQMASAVLDTMTVHLTNQGVEFRATGSKVKFKGFMKVYIE
GNDDNKKEKDKMLPNLEEGMTVKAEAIKPNQHFTQPPPRYTEARLVRTLEELGIGRPSTY
APTLDVIQRRGYVALDNKRFVPTELGEIVLDQLKEYFPEIIDADFTKEMEDDLDSIEEGE
QNWVSIIADFYKGFEPRLEKAEKEMEEIEIKDEPAGIDCENCGHEMVYKMGRYGKFLACS
NFPECRNTKPILKKVGVTCPKCKEGEVVERKSKKNRKFFGCDRYPECDFISWDKPITRPC
PRCQSLLVEKRAKKGTQIQCTECDYKEQQQS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagactatctcgtaatagttgaatcaccagcaaaagcaaaaacgattgaacgatat
cttggaaaaaaatacaaagtaaaagcatcccttgggcacgttcgtgacttgcctagaagt
cagatgggtgtcaatgttgaagaagagtttgaaccgaaatatattaccattcgcggcaaa
ggccctgttctaaaagatttaaaagcagcagccaaaaaggcaaaacgcgtttatctagca
gccgaccccgatcgcgaaggggaggctatcgcctggcatttggcccatagcttagatatt
gatgagcaatcaaagtgtcgagtcgtgtttaacgaaatcactaaagaagcgattaaggat
tcatttaaacaaccaagaacgattgattccgatcttgttgatgctcaacaagcgcggcga
attctagatcgacttgtcggttacaatatcagcccgattctttggaaaaaagttaagaag
gggctcagtgcaggtcgtgtccaatccgtagccgtaaaaattattatcgatcgagagaat
gaaattaaaaaattcaagcccgaagaatattggacaatcgaagccgatttcttaaaagaa
aaagaaacatttgaaggctctttttacggagtggacggaaagaagaaggaacttaaaact
aaagaagatgtggaagaggttaaaagcaagctgaaaggcgactcgtattcggttgataaa
gttaataaacgcgagcgccgcagaaatccttctttaccatttaccacatcatctcttcaa
caagaggcagcgagaaagctgaactttcgtgcaaagaaaacgatgatgattgcccagcag
ctttatgaagggatagatcttggcgggaaacaagggactgcaggtttgattacctatatg
cgtacggattccactagactttcaaacacagctaaggaagaagcaaagaattatattgaa
tcgacctatggcaaagaatacttgggtaaaagtaaagcaacgaaaaagcaagagggagct
caggatgcccacgaggcaatcaggccaacgagtgctgcgcgtgatccgaaatcaatgaaa
aagacgttatcgagggatcagcaccgtctttataaactaatttgggatcggtttttagcc
agtcaaatggcgtccgctgtcttagatacgatgacggttcacttaacaaaccagggtgtt
gaatttagagctacaggctcaaaagttaaattcaaagggtttatgaaagtgtatattgaa
ggcaacgacgataataaaaaagagaaagataaaatgctgccaaacttagaggaaggaatg
acggtgaaggcggaggcaatcaagcccaaccaacacttcacccaacctcctccacgctac
acagaggcacgtttagtaagaacacttgaagaacttggaattggcagaccatccacctat
gctccaacattggatgtcatccagcgccgtggctatgtagcgcttgataataagcgcttt
gtaccgacagaacttggagagatcgttttagatcaactcaaagaatattttcctgaaatt
attgatgcagatttcacgaaggaaatggaagatgatcttgattcgattgaagaaggagaa
caaaattgggtatccataatcgctgacttttataaaggctttgaacctaggcttgagaaa
gcggaaaaagaaatggaagaaattgaaatcaaagatgaaccggctggaattgactgtgaa
aattgcggacatgagatggtatataaaatgggccgctacggtaaattcctggcctgctcg
aacttccctgaatgcagaaatactaagcctattcttaaaaaagtcggcgtcacttgtcct
aaatgtaaagaaggagaagtcgtcgaacgaaaaagcaagaagaatcgtaagttctttggt
tgtgatcggtaccctgaatgtgactttatttcatgggataaaccgattactagaccttgt
ccgagatgccagtccttattggttgagaagcgagctaaaaaaggaactcaaattcagtgc
acagaatgtgattataaagaacagcagcaatcataa
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