Halobacillus shinanisalinarum: MUO14_23160
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Entry
MUO14_23160 CDS
T09504
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
hshi
Halobacillus shinanisalinarum
Pathway
hshi02020
Two-component system
hshi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hshi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MUO14_23160
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MUO14_23160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hshi03021
]
MUO14_23160
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hshi02035
]
MUO14_23160
Transcription machinery [BR:
hshi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MUO14_23160
Bacterial motility proteins [BR:
hshi02035
]
Flagellar system
Flagellar assembly proteins
Stator
MUO14_23160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
Motif
Other DBs
NCBI-ProteinID:
UOQ93242
UniProt:
A0ABY4H0S3
LinkDB
All DBs
Position
4668154..4668927
Genome browser
AA seq
257 aa
AA seq
DB search
MAGSISPQEQELWDLWINEQNTEAANELVQQYYYLVRFHVQRIAAHLPRSVSKDDVKSLG
LLGLYDALKKFDLTRDLKFDTYASFRIRGTIMDGLRKEDWLPRSVRDKAKKIEHTAEHIE
QQYHRPATSIEIAAELNMSKVEVEEIMKDALFSHVLSIEEKVKDSPDEHKEGIGYSIPDK
DTPTPTESLVREENYRELAQHIKRLNEKEQLVVSLFYTEELTLTEIGEIMDLTTSRISQI
HARAIVKLRNSLMNVVG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctctatatctcctcaagaacaagagctgtgggacctttggataaacgagcaa
aacacggaagcagcaaatgaattagtgcagcaatactattatttagttcgctttcacgtc
cagcgaatagctgctcatctaccgagaagcgtcagtaaagatgatgtgaagagtcttgga
ttgcttggtttatacgatgctttaaaaaaatttgatctcacccgtgacttaaagtttgat
acctatgcctcctttcgaatacgggggacaatcatggatgggctacgtaaagaggactgg
cttccacgatccgtccgtgataaagcaaaaaagatcgaacatacagctgaacatattgaa
cagcagtatcacagacccgcaacctcaatagaaattgctgcagagcttaacatgtcaaag
gtcgaagttgaagagatcatgaaggatgctctcttttctcatgtgctttcaattgaagaa
aaagtaaaagacagccctgatgaacataaagaaggtattggttattccatacctgataaa
gatacaccaacaccaaccgaaagtcttgtaagggaagagaattacagggaattagcccag
catataaaaagattgaatgaaaaagaacagctggtcgtgagtttgttttacacagaagaa
ttaaccttaacagaaattggcgaaatcatggatttaacgacatcgagaatttcgcaaatt
catgctagagctatcgttaagctgcgaaactcactaatgaatgttgtaggttaa
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