Halobacillus shinanisalinarum: MUO14_23270
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Entry
MUO14_23270 CDS
T09504
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hshi
Halobacillus shinanisalinarum
Pathway
hshi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hshi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUO14_23270 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hshi03019
]
MUO14_23270 (pnp)
03016 Transfer RNA biogenesis [BR:
hshi03016
]
MUO14_23270 (pnp)
Enzymes [BR:
hshi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MUO14_23270 (pnp)
Messenger RNA biogenesis [BR:
hshi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MUO14_23270 (pnp)
Transfer RNA biogenesis [BR:
hshi03016
]
Prokaryotic type
tRNA degradation factors
MUO14_23270 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
SPATA25
S1_2
Motif
Other DBs
NCBI-ProteinID:
UOQ93262
LinkDB
All DBs
Position
4691434..4693551
Genome browser
AA seq
705 aa
AA seq
DB search
MAEEKQVFSIDVAGRTFSVEVGELAKQANGAAMISYGDTAVLSTATGSKEPKDLPFFPLT
VNYEERLYAVGKIPGGFIKREGRPSDKAVLASRLIDRPIRPMFPDGYRNDVQVIGTVMSV
DQDCSSEMAAMLGSSIALGISDIPFGGPIAGVIIGRVDGELIINPTVKQQENSDINLTVA
GTKDAINMVEAGANEVSEEDMLEAIMFGHEEIKRLVAFQEEIVAAVGREKMDVQLFDHDQ
ELKEKVEAEATESIVAAIKTEEKKAREEAIDGAKEAIVTAYEELEADEDTIKQVKAILED
IVKAEVRRLITKDKIRPDGRGVDEIRPLSSRVGVLPRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLDLEESKRFMHHYNFPKFSVGETGPIRGPGRREIGHGALGERALEVVIPSEK
EFPYTMRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKAGEDYSILT
DIQGMEDHLGDMDFKVAGTEKGVTALQMDIKIDGLSREILEEALAQAKKGRKEILKSMLA
TISETRSELSQYAPKIMTMKINPDKIRDVIGPSGKQINKIIDDTGVKIDIEQDGTVFVSS
TDAEMNKVAMKIIEDIVREVEAGEIYDGTVKRIEKFGAFVELFKGKEGLVHISELAEERI
GKVEDVVSLGDTIKVKVKEIDKQGRINLSRKAILVDEKKAQEANE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaaaagcaagtgttttcgattgacgtagcaggccggacattctccgttgaa
gtaggagaattggctaaacaggctaatggagctgctatgatcagctatggtgatacggcg
gttctttccaccgcgacaggttctaaagagccaaaggatttaccatttttcccgctcact
gttaactatgaagagcgtttatatgcagttggtaaaatcccgggaggttttattaagcgt
gaggggcgcccaagtgataaggctgtattggcttcccgtctgattgaccgcccaatacgt
cccatgtttcctgatggttaccgaaatgacgtacaagtaataggtacagttatgagtgta
gatcaggattgttcatctgagatggctgcgatgctaggatcctctattgctttaggaata
tccgatataccatttggcggtccgattgccggtgtgattattggaagagttgatggcgag
ctaatcatcaacccaacggtcaagcaacaggaaaacagtgatatcaacttgactgtcgct
ggaacaaaagatgcgattaacatggttgaagctggagccaatgaagtatctgaagaggac
atgcttgaagctatcatgtttggtcatgaagagattaaacgtttagtggccttccaggaa
gaaatcgttgccgccgttggaagggaaaaaatggacgtgcaattgtttgaccatgatcag
gaactaaaagagaaagtcgaagctgaagcaaccgaatcaatcgttgctgcgattaaaaca
gaagagaagaaagcacgtgaagaggcaattgacggagcaaaagaggctatcgttacagcc
tatgaagaattggaagcagatgaagatacgattaaacaagtgaaagcgatcttggaagac
atcgttaaagcggaagttcgccgtctaattacgaaagataaaattcgcccagatggacgc
ggtgttgatgaaattcgtccattatcttccagagtaggggttttacctcgcacacacggt
tctggtttatttacaagaggacaaactcaagctctaagcatttgtacactgggtgcttta
ggggacgtccaaattctagacgggttagatcttgaagaatcaaaacggtttatgcaccat
tataacttccctaaattttctgtaggagaaacggggccgatacgtggtccaggtcgtcgt
gaaattggtcacggtgctttaggtgagcgcgcgcttgaagtagtcattccttctgaaaaa
gaatttccttatacgatgcgtctcgtatcagaagtacttgaatcaaatggctcgacttcc
caagcaagtatttgcgcaagtacgttagcgatgatggatgcaggtgtacctattaaagct
cctgtagccggcattgcgatgggtcttgtcaaagcaggagaagactatagtattcttaca
gatattcaagggatggaagatcaccttggggacatggactttaaagtagcaggtaccgaa
aaaggggtaaccgcacttcaaatggatattaaaatcgacgggttatctcgtgaaatctta
gaagaggcactggcacaagcgaaaaaaggacgtaaagaaatcctgaaatctatgcttgcc
acaatttcagaaacgagaagtgaactttcccagtatgcgcctaagatcatgacgatgaag
attaatcctgataaaatccgcgatgtcattggaccaagcggaaaacaaattaataaaatc
attgatgacacaggcgtaaaaatcgatatcgagcaggatggcaccgtgtttgtctcttcc
acagatgctgaaatgaacaaagtagccatgaaaatcattgaagatatcgttagagaagtg
gaagcaggcgaaatttacgatggaacagtaaaacgaatcgagaagtttggcgcttttgtt
gaattgttcaaagggaaagaaggtcttgtgcacatttccgaattagctgaagagcgaatt
ggaaaagtggaagatgttgtttcgttgggagacacaattaaggtaaaagtcaaggagatt
gataagcagggaagaattaatctttctcgtaaagcaatcctggttgacgagaagaaggca
caagaagcaaatgagtaa
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