Halomonas aestuarii: BOX17_00385
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Entry
BOX17_00385 CDS
T04554
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hsi
Halomonas aestuarii
Pathway
hsi03030
DNA replication
hsi03430
Mismatch repair
hsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BOX17_00385
03430 Mismatch repair
BOX17_00385
03440 Homologous recombination
BOX17_00385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsi03032
]
BOX17_00385
03400 DNA repair and recombination proteins [BR:
hsi03400
]
BOX17_00385
Enzymes [BR:
hsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BOX17_00385
DNA replication proteins [BR:
hsi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BOX17_00385
DNA repair and recombination proteins [BR:
hsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BOX17_00385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PAS_4
DNA_pol_A_exo1
PAS
PAS_8
PAS_9
DUF8048
Motif
Other DBs
NCBI-ProteinID:
APE29549
UniProt:
A0A1J0VC01
LinkDB
All DBs
Position
94616..96685
Genome browser
AA seq
689 aa
AA seq
DB search
MARRSKSLPRRQRLIGLWLLLSGISIFGGAVFALWLDGLAGLEGMARVWLWLGCFSGGGT
IFLVGLLLERQLFTPLRHLQVQLARLVANPDARQDYPPEGWLRGLGPDLVRVREAWRTDR
ERLATAHAEGASSAARIRQELETLLQVLDTPLLLCDHHRRVLLFNQAAETLFEGHPGLGL
GKRLDALLPITSLGDALGQLPDDGAPREILVPCDERWLHVVMRRVPNSHNETLLTLTDTT
AAWSSEMGARADLAEMLPPLRRHTASLTSAADALVGVRTASPTSELGQRLEAVIDEEGRA
LARQLEQMGKVMEDMHRQGERLVPLWSNDLWASLGERLGKDHLHITPIGMPAWLKGDAPA
LLALLGSLLPRLATHCDNGELEGEVCLGNRRVYLDVIWQGRPLGEQLLDEWRAERLEALP
FGPRVGDVLRQHTSDAWSLADEDGEHARLRLPLPAADRVGAPRPHTPPRPEFHDFGIAEM
PPPDAELAARPLRTLEVVAFDTETTGLELRNGDTVISLGACRIVNARLLASDVLDLRVDP
GRPIPPASTAIHGITDDDVAGAPPLAVALPRFRDYIGEAVILAHNAAFDLLAIQPPGGSV
TFDMPVLDTLLLSRALDESLDGHDLDSLADRYDLSFPPGTRHTALGDARVTAELWLSLLP
RLEARGIETLEQALALQASAFDREDAFAS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcgaagcaagagtctgccccgtcgccagcggctgatcggcctgtggctgctg
ctcagcggcatcagcatcttcggcggcgccgtgttcgccctgtggctggacggcctggcc
gggctcgaaggcatggcgcgggtgtggctctggctgggctgcttctcggggggcggcacc
atcttcctggtcggcctgctcctcgagcgccagctcttcaccccgttgcgccacctgcag
gtgcagctggctcgcctggtggccaaccccgatgcccgccaggattacccgcccgaaggg
tggctgaggggcctcggcccagacctggtgcgcgtgcgagaggcctggcggaccgatcgc
gagcgacttgccaccgcccatgccgagggcgccagcagcgcggcgcgcatccgccaggaa
ctcgagaccctgctccaggtcctggacacgccgctgctgctctgcgatcaccatcgtcgt
gtgctgctcttcaaccaggccgccgagaccctattcgagggacatcccggactgggcctc
ggcaagcggctcgacgcgctgctgccgatcaccagcctcggggacgccctgggccagcta
cccgatgacggggcaccccgggagatcctggtgccctgcgacgagcgctggctgcacgtg
gtgatgcgccgcgtgcccaacagtcacaacgagaccctgctgaccctgaccgataccacc
gcggcctggtccagcgaaatgggcgcccgcgccgacctggccgagatgctgccgccactg
cgccgtcacaccgccagcctgaccagtgccgccgacgccctggtcggcgtccgcacggcg
tcgccgaccagcgaactgggccagcgcctcgaggccgtgatcgacgaggagggccgggcg
ctggcccgccagctcgagcagatgggcaaggtgatggaggacatgcaccgccagggcgag
cgcctggtgccgctctggtccaacgacctctgggcctcactcggcgaacgcctcggcaag
gaccacctgcacatcacgcccatcggcatgcccgcctggctgaagggcgacgccccggcg
ctgctggccctgctgggctcgctgctgccccggctggccacgcactgcgacaacggcgag
ctcgagggggaggtctgcctcggcaatcgccgggtctacctggacgtgatctggcagggg
cgccccctcggcgaacagctgctggacgagtggcgtgccgagcgactggaggccctgccc
ttcggcccgcgggtcggcgatgtgctccggcagcataccagtgatgcctggagcctggcc
gacgaggacggcgagcacgcccgcctgcgcctgccgctgcccgcggccgaccgggtcggt
gccccgcgcccgcacaccccgccgcgtccggagttccacgacttcggcatcgccgagatg
cccccaccggatgccgaactggcggcccgccccctgaggaccctcgaggtcgtggccttc
gacaccgagaccaccgggctggagcttcgcaacggcgacaccgtgatcagcctcggggcc
tgccggatcgtcaatgcccggctgctggccagcgacgtcctcgacctgcgcgtggacccc
gggcggcccattcccccggccagcaccgccatccacggcatcaccgatgacgacgtcgcc
ggcgcgccgccgctggccgtggccctgccccgcttccgcgactacatcggcgaggcggtg
atcctggcgcacaacgcggccttcgatctgctggccatccagccgcccggtgggagcgtc
accttcgacatgccggtcctcgacaccctgctgctgtcgcgcgccctcgatgagagcctc
gacggccacgacctcgacagcctggccgaccgctacgacctgagcttcccgccgggcacc
cgccacaccgccctgggcgacgcccgcgtcacggcggagctgtggctctccctgctgccc
cgcctggaggcccgcggcatcgagacactcgagcaggccctggcgctgcaggccagcgcc
ttcgaccgggaggacgccttcgcctcgtga
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