Halomonas aestuarii: BOX17_00480
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Entry
BOX17_00480 CDS
T04554
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
hsi
Halomonas aestuarii
Pathway
hsi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BOX17_00480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsi03400
]
BOX17_00480
DNA repair and recombination proteins [BR:
hsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BOX17_00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
HHH_5
UVR
HHH
GIY-YIG
HHH_2
HHH_3
DUF7508
Motif
Other DBs
NCBI-ProteinID:
APE29564
UniProt:
A0A1J0VC21
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Position
113574..115388
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AA seq
604 aa
AA seq
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MSFDSRDFLGSVSESPGVYRMLDEQGETLYIGKARRLRARLASYFRGALNTKTQALVGRI
ADIQVTVTNSETEALLLEQTLIKELRPAYNILLRDDKSYPFVFVTDRHPFPALEYKRARV
RRDDGRYLGPYPSSGAVRESLSLMQKIFRIRNCEDSVFAHRTRPCLQYQIHRCSAPCVGY
ISEADYRRDLEHAVMCLEGRSEAVTRELTEAMEAASGRLDFEEAARLRDQVQHLRQLQQR
QFVDTGGGDADVFALASRPGALCISVLTVRQGRLLGARHHAPANGLDLGPEALLGDFISQ
FYLGQAREIPAEVITSHPVPDADLIARALGERAGKRIRLTDQVRGHRAQWRELARTNAEQ
QLASQLASQTQLSKRFEALRETLDLESTPQRLECFDISHSHGEATVASCVVFDEGGPRKS
DYRRFNIEGVAAGDDYAAMRQALTRRFKRLAEGEGERPDILIVDGGKGQLNMAREVFAEL
GVSGVTLLGVAKGTTRKAGLETLFVETVDRSLDLDGASPALHLIQHIRDESHRFAIAGHR
ARRDKTRRTSTLQDIPGVGPRRRRELLRFFGGLHGVKQASREELARVPGISATLAETIHR
ALHG
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgattcccgcgacttcctcggcagcgtcagcgagtcacctggggtttaccgc
atgctcgacgagcagggcgagaccctctacatcggcaaggcccgtcggctccgggcacgc
ctggccagctacttccgcggcgcgttgaacaccaagacccaggccctggtgggccggatc
gccgatatccaggtcacggtgaccaacagcgagaccgaggcgctgctgctcgagcagacg
ctgatcaaggaactgcgtccggcctacaacatcctgctgcgcgacgacaagtcctacccc
ttcgtcttcgtcaccgaccgccaccccttcccggccctggagtacaagcgtgcccgggtg
cgccgtgacgacgggcgctatctggggccctaccccagcagcggcgccgtgcgcgagagc
ctgtcgctgatgcagaagatcttccgcatccgcaactgcgaggacagcgtctttgcccac
cgcacgaggccctgcctgcagtaccagatccaccgctgcagtgcaccctgcgtaggctac
atcagcgaggcggactatcgccgcgacctggagcatgcggtgatgtgcctggagggcagg
agcgaggcggtgacccgtgagctgaccgaggccatggaagccgcgagcggccgcctggac
ttcgaggaggccgcccggctgcgcgaccaggtccagcacctgcgccagctccagcagcgc
cagttcgtcgacaccggcggcggcgatgccgatgtcttcgccctggcgagccggcccggg
gcgctgtgcatctcggtgctcacggtgcgccagggccgcctgctgggggcccgtcaccat
gctcccgccaacgggctggacctggggcccgaggccctgctcggcgacttcatcagccag
ttctatctgggccaggcgcgggagatcccggccgaggtgatcaccagccaccccgtgccg
gatgccgacctgatcgctcgggcgctcggcgaacgggccggcaagcgcatccgcctgacc
gaccaggtgcgcggccaccgggcgcaatggcgcgagctggcccgcaccaatgccgaacag
cagctggccagccagctggcgagccagacccagctgtcgaagcgcttcgaggcgctgcgc
gagaccctcgacctcgagagcacgccacaacggctggagtgtttcgacatcagccacagc
catggggaggccaccgtggcgtcctgcgtggtgttcgacgagggtggcccgcgcaagtcc
gactaccggcgcttcaacatcgagggcgtggcggccggcgacgactatgccgccatgcgc
caggccctgacccgtcgcttcaagcgcctggccgagggggaaggcgagcggccggacatc
ctgatcgtcgatggcggcaagggacagctgaacatggcccgcgaggtcttcgccgagctc
ggcgtcagcggcgtcacgctgctcggcgtggccaagggcaccacccggaaagcgggcctg
gagacgctgttcgtcgagaccgtcgatcgcagcctggacctcgatggcgcctcccccgcc
ctgcacctgatccagcatatccgtgacgaatcgcaccgcttcgccatcgccggccaccgg
gcacggcgggacaagacccggcgcacctcgaccctgcaggacatccccggggtcggcccg
cgccggcgccgcgagctgctgcgcttcttcggcggcctgcacggcgtcaagcaggccagt
cgcgaggagctggcccgggtcccgggcatcagcgccaccctggcagagacgattcatcgc
gccctgcatggatga
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