Halomonas aestuarii: BOX17_03805
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Entry
BOX17_03805 CDS
T04554
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hsi
Halomonas aestuarii
Brite
KEGG Orthology (KO) [BR:
hsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsi03016
]
BOX17_03805
Enzymes [BR:
hsi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BOX17_03805
Transfer RNA biogenesis [BR:
hsi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BOX17_03805
Prokaryotic type
BOX17_03805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
APE32456
UniProt:
A0A1J0VK98
LinkDB
All DBs
Position
complement(862231..863283)
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AA seq
350 aa
AA seq
DB search
MLDEAFGPPPAGDYRAAPEDFRVEEVLDFVPEGEGEHLWLFLEKRDLTTAMVARELARLC
EVSPRVVGFAGMKDRVAVTRQWLSVQLPGREAPEGLVERLAERGIRVLDQARHPRKLKRG
VHRANRFQLRLTGAAVADADLESRWQRLCQEGVANYFGPQRFGPQGRNLQRARAVLARGW
RKRDDREGMLLSAARSFLFNELLAERIRDGSWATPLPGEVVMLDGSASQFGVAPDDAGQL
AELRERAAQLDLHPAGVLWGVGASRAAGEARAREEALAAGYPGLCGGLEHAGVRLARRAL
RLRLVDPALTRGDDELWLSFSLPRGAFATAVLRELIAHPTLEPPSSDRSR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgaggcgttcggccccccgccggccggcgattaccgtgccgcccccgaggac
ttccgggtcgaggaggtgctcgacttcgtccccgagggcgagggcgagcacctctggctc
ttcctcgagaagcgcgacctgaccaccgccatggtggcccgggagctggcccgtctgtgc
gaggtctcgccgcgggtggtcggctttgccgggatgaaggatcgcgtggccgtgacgcgc
cagtggctgtcggtgcagctgccggggcgcgaggcccccgagggcctggtcgagcggctc
gccgagcgcggtatccgggtgctcgatcaggctcgccatccccgcaagctcaagcgtggc
gtgcatcgcgccaaccgcttccagctgcgactcaccggggcggcggtggccgatgccgac
ctcgagtcgcgctggcagcgcctctgccaagagggggtcgccaactatttcggcccccag
cggttcggcccccaggggcgcaacctgcagcgtgcccgcgccgtgctggcgcgaggctgg
cgcaagcgggacgatcgcgagggcatgctgctgtcggcggcccgcagcttcctcttcaac
gagctgctggccgagcgcatccgcgacggcagctgggcgacgcccctgcccggcgaggtg
gtgatgctcgacggcagtgccagccagttcggcgtcgcgccggacgatgccgggcagctc
gccgagctgcgcgagagggcggcacaactcgacctgcatcccgccggcgtgctgtggggc
gtcggcgcctcccgtgccgccggcgaggcccgagcccgggaggaggccctggccgcgggc
taccccggcctgtgcggcgggctcgagcatgccggggtccgcctggctcgccgggcactg
cggctgcgcctcgtcgacccggcactgacgcgcggcgacgatgagctctggctatccttc
agcctgccccggggcgccttcgccacggccgtgctgcgtgagctgatcgctcacccgacc
ctcgagcccccttcctccgacaggagccgttga
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