Halomonas aestuarii: BOX17_04975
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Entry
BOX17_04975 CDS
T04554
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hsi
Halomonas aestuarii
Pathway
hsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BOX17_04975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsi03400
]
BOX17_04975
Enzymes [BR:
hsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BOX17_04975
DNA repair and recombination proteins [BR:
hsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BOX17_04975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
AAA_22
Helicase_RecD
AAA_16
SLFN-g3_helicase
UvrD-helicase
nSTAND3
AAA_28
MeaB
FtsK_SpoIIIE
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
APE30364
UniProt:
A0A1J0VEB0
LinkDB
All DBs
Position
1117005..1119200
Genome browser
AA seq
731 aa
AA seq
DB search
MMPDTPNHTAAPEAALMQAPEQALANHAALFALLDRWVARGWLRSLDRAFAAFLHREATA
ANGVSEASPLLLLAAALASHQLGRGHVCLDLTQTLATPDLALSLPPEGDSLEDPPPLPSR
VMAALELDAWRAALAQPELVAEGPGSTPLVLAGSRERPRLYLRRYWQHEQDIHSRINERL
GEAKSDDETPDAARLRPILNALFPNRSDAPHAIDWQKAACALAGRSRFAVITGGPGTGKT
TTVVRLLALLQALALGENGGEGEGEGEQALRIRLAAPTGKAAARLNESIAGQVAKLDLDG
LADDPERLRSVIPKEVSTLHRLLGSRPDTRRFRHDRHNPLPLDVLVVDEASMVDVGMMAA
MLEALPPRARLVLLGDKDQLASVEAGSVLGDLCARAEGGHYTPATAEWLGEATGQPLPAK
TLDADGQPLDQAIAMLRVSHRFTADSGIGQLAAAINLEAAPAAKRHAITTALTHGFADLS
HHKLSADDERGLARLAVTGCPERFPNAKAADAPPVGYRHFLSVMTEQRPADQADQQDFDD
WARQVLAAHGDFQLLCALRRGPWGVEGLNERVRQALEQEKLIDSEDGRQRWYPGRPVLVT
KNDYGLGLMNGDIGITLDMPRPGAVPGDGSRRLLRVAFPAGDGTDRIKWVLPSRLQAVET
VFAMTVHKSQGSEFTHAALVLPDAPNPILTRELVYTGITRARHWLTLVETGRGQLMDAAQ
RRVMRVSGLGS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggataccccgaaccacactgccgcgcccgaagccgcgctgatgcaagcgccc
gaacaggcgctggccaatcacgcggcgctcttcgccctgctcgaccgctgggtggcgcgc
ggctggctgcgctcgctggaccgcgccttcgccgccttcctgcatcgcgaggcgacggcg
gccaacggggtgagtgaagcctcacccctgctgttgctggcggccgcactcgccagccac
cagctcggccgcggccacgtctgcctggatctcacccagacgctcgccacgccggacctc
gcgctctcgctgccgccggagggcgacagcctggaggacccgccgccgctgcccagccgg
gtgatggccgcgctggagctggacgcctggcgtgcggcgctggcccagccggagctggtc
gccgagggccccggcagcaccccgctggtgctcgccggaagccgagagcgcccccggctc
tacctgcgccgctactggcaacacgagcaggatatccacagccggatcaatgagcggctc
ggcgaggcaaagagcgacgacgagaccccggatgcggcccgcctgcgcccaatcctcaac
gccctcttccccaaccggagcgatgccccgcacgcgatcgactggcagaaggccgcctgt
gcgctggccggccgctcgcgcttcgcggtgatcaccggcggccccggtaccggcaagacc
accaccgtggtgcgcctgctcgccctgctccaggcgctggccctcggcgaaaatgggggt
gaaggcgagggtgagggagaacaggccctgcgcatccgcctggccgcccctaccggcaag
gccgccgcccggctcaacgaatccatcgccggccaggtggcgaagctcgacctcgacggc
ctggccgacgaccccgagcggctgcgaagcgtcatccccaaggaggtctcgacgctgcac
cggctgctcggctcccgacccgacacccgccgcttccgccacgaccgccacaacccgctg
ccgctggacgtgctggtggtggacgaggcctcgatggtggatgtgggcatgatggccgcg
atgctcgaggcgctgccgccccgggcgcggctggtgctgctcggcgacaaggaccagctc
gcctcggtggaggccggctcggtgctcggcgacctgtgcgcccgggccgagggcggccac
tacacccctgccaccgccgagtggctgggagaggccaccggccagcctctgcccgcaaag
acgctggacgccgacggccagccgctggaccaggccatcgccatgctgcgcgtcagccac
cgcttcaccgccgacagcggcatcggccagctggccgcggcgatcaacctcgaggccgcg
cccgccgccaagcgccacgccatcaccacggcgcttacccacggcttcgcggacctctcg
caccacaagctttccgccgacgacgagcgcggcctggcccgcctggccgtgaccggctgc
cccgagcgctttccgaatgccaaggcagccgatgcgccgccggtgggctatcgccacttc
ctgagcgtgatgaccgagcagcgcccggccgaccaggcggatcagcaagacttcgatgac
tgggcaagacaggtgctcgcggcccacggcgacttccagctgctgtgcgcactgcgccgc
ggcccctggggcgtggagggcctgaacgagcgggtgcgccaggcgctggagcaggagaaa
ctgatcgacagcgaggacggccgccagcgctggtaccccggccgcccggtgctggtcacc
aagaacgactacggcctggggctgatgaacggcgatatcggcatcaccctggacatgccg
cgcccgggcgctgtgcccggcgacggcagccgccgcctgctgcgggtggccttccccgcc
ggcgacggcaccgatcgcatcaagtgggtgctgccctcgcgcctgcaggcggtggagacg
gtgttcgcgatgacggtgcacaagtcccagggctcggagttcactcacgccgccctggtg
ctgcccgacgcgccgaaccccatcctcacccgggagctggtctacaccggcattacccgc
gcccgccactggctgacgctggtcgaaaccggccgcggccagctgatggacgcggcgcaa
aggcgagtgatgcgagtgagtgggttggggagttga
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