Halomonas aestuarii: BOX17_06750
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Entry
BOX17_06750 CDS
T04554
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
hsi
Halomonas aestuarii
Pathway
hsi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hsi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BOX17_06750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsi03000
]
BOX17_06750
Transcription factors [BR:
hsi03000
]
Prokaryotic type
Helix-turn-helix
Other families
BOX17_06750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
GAF_2
AAA_5
GAF_3
Mg_chelatase
AAA_2
MCM
AAA_16
AAA_19
HTH_30
ATPase
AAA
HTH_28
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
APE30679
UniProt:
A0A1J0VF89
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All DBs
Position
1489574..1491205
Genome browser
AA seq
543 aa
AA seq
DB search
MTTTSRDPGDGAADLTLLHEAAKLLGQSATPELAITGTLRLMSQMLGLNRGRVLLPGPDD
QAVLQIRYSYGLTPEEGKRGHYRADEGITGRVMRTGQLAVIQNIEEEPDYLFRAVDRTTL
PEGVVAYIAVPIMDGSMPLGVLACHRLRMRPRPIQADLVILQILSTIIAQILRINSLIDE
RTRLLKDENQELKETLQKSQTNHGILGESPAIRDALRQVMRVADTSVSVLLTGESGTGKE
RFSHLLHLNGARRDQPFLAINCAAIPEQLLESELFGHERGAFTGATATKQGKIEMAHGGT
LFLDEIGDLNLELQSKLLRVLESQVIQHVGGVKDIPVDVRIITATHQNLQEAVNQGRFRL
DLFYRLNVFPIHLPPLREREGDTRLLARHFLLGANREYARYTRFGQGVMERLESYHWPGN
IRQLENVVKRAVLVAQQGEIRIEDIETILHQESAVSGHPEANRAVPATARHSPSPSSAPA
QGSGHPQPNGPSRPYQWVREDEAAMLQEALKRTGGNKTQAAAVLGMTPRQFRYRLDKLGL
HDD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgacgtcccgcgacccgggcgacggtgccgcggacctgaccttgctccacgag
gccgccaagctactgggccagtccgccacccccgaactcgccattaccggcacgctgcgc
ctgatgtcgcagatgctgggcctcaaccgtggccgcgtcctgctgcccggtcccgacgac
caggcggtcctgcagattcgctacagctatggcctgacgcccgaagagggcaagcggggg
cactatcgcgcggatgagggcatcaccggcagggtcatgaggaccgggcagctggccgtg
atccagaacatcgaggaggagccggactacctgttccgtgcggtggaccggaccaccctg
ccggagggcgtcgtcgcctacatcgcggtgccgatcatggacggcagcatgccgctgggc
gtgctggcctgccaccgactgcggatgcggcctcgcccgatccaggcagacctggtgatc
ctgcagatcctcagcaccatcattgcccagattctcaggatcaacagcctcatcgatgag
cgcacgcggctcttgaaggatgaaaaccaggagctcaaggagaccctgcagaaaagccag
accaatcacggcatcctcggcgaaagcccggccattcgcgatgccctgcgccaggtgatg
cgggtggccgatacgtcggtcagcgtgttgctgaccggcgagtcaggcaccggcaaggag
cgcttctcgcacctgctgcatctcaacggcgcccggcgagaccagcccttcctggccatc
aactgcgccgccattcccgagcagttgctggaatcggagctgttcggccatgagcggggc
gccttcaccggcgccaccgccaccaagcagggcaagatcgagatggcccacggcggcacc
ctgttcctggacgagatcggcgatctcaacctggaactgcaatcgaagctgctgcgcgtg
ctcgagagccaggtgatacagcatgtcggcggcgtcaaggatatccccgtggacgtgcgc
atcatcaccgcgacccaccagaacctccaggaggcggtcaaccaggggcgctttcgtctg
gacctcttctatcgcctcaacgtgtttccgattcacctgccgccgctgcgcgagcgagag
ggtgacacccgcctgctggcccgacacttcctgctcggcgccaaccgggagtatgcccgc
tatacgcggttcggccagggggtcatggaacgcctggagagctatcactggccgggcaac
attcgacagctcgagaacgtcgtcaagcgcgcggtgctggtcgcccagcagggcgagatc
cgcatcgaggatatcgagacgatcctgcatcaggagtcggccgtcagcggccacccggag
gccaaccgggcggttccggccaccgccaggcattcgccatctccgtcatcggcgcctgcc
cagggatccggccacccccagccaaacggcccctctcgcccctaccaatgggtgcgcgag
gacgaagcggcgatgttgcaggaggccctgaaacgcacggggggcaacaagacgcaggcc
gcggccgtgttgggcatgaccccccggcagttccgctaccggctggacaagctgggcctg
cacgacgattga
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integrated database retrieval system
