Halomonas aestuarii: BOX17_10665
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Entry
BOX17_10665 CDS
T04554
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
hsi
Halomonas aestuarii
Brite
KEGG Orthology (KO) [BR:
hsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsi03009
]
BOX17_10665
Enzymes [BR:
hsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BOX17_10665
Ribosome biogenesis [BR:
hsi03009
]
Prokaryotic type
rRNA helicases
BOX17_10665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
PRAI
CMS1
Motif
Other DBs
NCBI-ProteinID:
APE31369
UniProt:
A0A1J0VH67
LinkDB
All DBs
Position
2314242..2315636
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AA seq
464 aa
AA seq
DB search
MSDSSADFAALPLAPELLSNLATLGYRTMTPIQAESLPPMLAGRDVIARARTGSGKTAAF
GLGLLSRLTLSSARVQGLVLCPTRELADQVAGELRRLARSLPNVKVLTLCGGAPLGPQLA
SLAHGAHVVVGTPGRVEEHLRKGSLDLSGLETLVLDEADRMLDMGFQAAMEAIIAETPPS
RQMLLFSATYAEAIRPIAEGLMRDPVTVEVVEPHDETTIRQHFYRVADESARFEALRRLL
LHVRPAASVVFCNTKRETDEVADALNEAGFSALALHGDLEQRDRDRLLVLFANGSVSILV
ATDVAARGLDIDALDAVFNYRIARELEVHVHRIGRTGRAGGSGMACTLVAEQEDYRLARL
ADFLGETLETEPLPSRAVLERTPVTPAMATLELGGGKKQKLRPGDILGALTGEGGIAGDQ
VGKIKVLANCAYVAVRRDVVRAALDQLANGKLKGRSFRARRIRG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgattcctctgccgacttcgccgcgctgccgctggcgccggaactgctgtccaat
ctcgccacgctgggctaccgcaccatgacgccgatccaggccgagagcctgccaccgatg
ctggcgggacgcgacgtcatcgcccgggccaggaccggctcgggcaagaccgcggccttc
ggcctggggctgctctcgcggctgacgctctcgagcgcccgggtgcaggggctggtgctc
tgcccgacccgggagctcgccgaccaggtggccggcgagctgcgtcgcctggcgcgcagc
ctgcccaacgtcaaggtgctgaccctgtgcggcggcgctcccctggggccgcagctcgct
tcgctggcgcatggcgcgcatgtcgtcgtcggcaccccggggcgggtggaggagcacttg
cgcaagggctcgctcgacctctcagggctcgagaccctggtgctggacgaggccgaccgg
atgctggacatgggcttccaggccgccatggaggcgatcatcgccgagaccccgccgagc
cgccagatgctgctcttcagcgccacctatgccgaggccatccggcccatcgccgagggc
ctgatgcgcgacccggtcacggtggaggtggtcgagccccatgacgagaccacgatccgc
cagcacttctaccgggtggccgacgaatcggcccgcttcgaggcgctgcgccgcctgctg
ctgcacgtcaggcccgccgccagcgtggtgttctgcaacaccaagcgcgagaccgacgag
gtcgccgatgccctgaacgaggcgggcttcagcgccctggcgctgcacggcgacctcgag
cagcgcgaccgcgaccgcctgctggtgctgttcgccaacggcagcgtctcgatcctggtg
gccaccgacgtggccgcccgcgggctggacatcgatgccctggacgcggtgttcaactac
cgcatcgcccgggagctcgaggtgcacgtccaccgcatcgggcgcaccggccgcgccggg
ggctccggaatggcctgtaccctggtggccgagcaggaggactaccggctggcgcggctc
gccgacttcctgggcgagacgctggaaacggagccgctgccttcccgcgcggtcctggag
cgtactcctgtcacgccggccatggcgacgctcgagctcggtggcggcaagaagcagaag
ctgcgccccggcgacatcctcggcgccctgaccggcgagggcgggatcgccggcgaccag
gtgggcaagatcaaggtgctcgccaactgcgcctacgtggccgtgcgccgggacgtcgtc
cgggcggccctcgaccagctggccaacggcaagctcaaggggcgcagcttccgggcccgt
cgcatccgcggctag
DBGET
integrated database retrieval system
