Halomonas aestuarii: BOX17_11920
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Entry
BOX17_11920 CDS
T04554
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hsi
Halomonas aestuarii
Pathway
hsi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BOX17_11920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsi03019
]
BOX17_11920
03009 Ribosome biogenesis [BR:
hsi03009
]
BOX17_11920
Enzymes [BR:
hsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BOX17_11920
Messenger RNA biogenesis [BR:
hsi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BOX17_11920
Ribosome biogenesis [BR:
hsi03009
]
Prokaryotic type
rRNA helicases
BOX17_11920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
DUF6822
Motif
Other DBs
NCBI-ProteinID:
APE31594
UniProt:
A0A1J0VHV2
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All DBs
Position
2585585..2587276
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AA seq
563 aa
AA seq
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MTSTSVVSPTFGDLALLPAVLSAVESQGYETPSPIQAQTIPALLEGRDMLGQAQTGTGKT
AAFALPLLSRLDLARREPQVLVMAPTRELAQQVAVSFSKYGQNLKGLEVATLCGGQEYRE
QLSALRRGAHVVVGTPGRIIDHLDRGSLKLDGLSALVLDEADEMLRMGFIDDVKRVVADT
PKNAQRVFFSATLPAEIERIVNRYLVDPVKVAIESKTGTAASIEQRMVRVDGGAKQEALA
RILEVEPVDGAIVFVRTRAACTTLMEQLSARGMSVASLSGDLDQSLRERTIQRLKRGKVD
VLIATDVAARGLDVPRITHIINYDLPQDGEAYTHRIGRTGRAGRTGIAITFVGFREGRKV
GWLEQATGQKMTEMAVPDEAAIRGHRDEMFHQRVVAALTAGADEQRALVERMVEEGHDPV
ELACAFARMARADEPPIGRLQAPRAERNTADSKPKRRDSAPREGMTRYRVAVGHQDGVKP
GQLVGALANEGGIEGNRIGRIDIRTAFSVVELPSSLPESILAKMARARVAGRPLEISEDR
GAPERAPRRRQDSDAPIRRRTSA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgacttctgtcgtctcgccgaccttcggcgatctggccctgctgcctgccgtt
ctttctgccgtggaatcccagggctacgagaccccgtcaccgatccaggcgcagaccatt
ccggcgctgctggaaggccgcgacatgctgggccaggcccagaccggtaccggcaagacc
gctgccttcgccctgccgctgctgtcccgcctcgacctggctcgccgtgagcctcaggtg
ctggtgatggcgccgacccgtgagctggcccagcaggtggccgtgtccttcagcaagtac
ggacagaacctcaagggcctggaagtcgccaccctgtgtggtggtcaggaataccgtgag
cagctctccgccctgcgtcgtggcgcccatgtggtggtcggcacccccggccgtatcatc
gatcacctggatcgcggcagcctcaagctcgacggtctgagcgccctggtgctcgacgag
gccgacgagatgctgcgcatgggcttcatcgatgacgtcaagcgcgtggttgcggatacc
cccaagaatgcccagcgggtcttcttctccgctaccctgccggccgagatcgagcgcatc
gtcaatcgctacctggtggatccggtcaaggtggccatcgagtccaagaccggcaccgcg
gccagcatcgagcagcgcatggtgcgggtcgacggcggtgccaagcaggaggcgctggcg
cgcatcctcgaggtcgagcccgtcgatggcgccatcgtcttcgtgcgtacccgcgccgcc
tgcaccaccctgatggagcagctctccgctcgcggcatgagcgtcgccagcctgtcgggt
gacctggaccagagcctgcgcgagcgcaccatccagcgcctcaagcgcggcaaggtcgac
gtgctgatcgccaccgacgtggccgcccgcggcctcgacgtgccgcgcatcacccacatc
atcaactacgacctgccgcaggacggcgaggcctatacccaccgcatcggccgtaccggc
cgtgccgggcgcaccggtatcgcgatcaccttcgtcggcttccgcgagggccgcaaggtg
ggctggctcgagcaggccaccggtcagaagatgaccgagatggccgtgcccgacgaggcg
gccattcgtggccatcgcgacgagatgttccaccagcgcgtggtcgccgccctgaccgcc
ggtgccgacgagcagcgtgccctggtcgagcggatggtcgaggaggggcatgaccccgtc
gagctggcctgtgccttcgcgcgcatggcccgggccgacgagccgcccatcggtcgcctg
caggcgccccgtgccgagcgcaacacggctgacagcaagccgaagcgtcgtgacagcgcc
ccgcgcgagggcatgacccgctaccgcgtcgccgtgggtcaccaggatggcgtcaagccg
ggccagctggtcggggccctggccaacgagggcggcatcgagggcaaccggatcggtcgc
atcgacatccgtaccgccttctcggtggtcgagctgccgagctcgctgccggagagcatc
ctggccaagatggcccgggctcgcgtcgccggccgccccctggagatcagcgaggatcgc
ggtgctcccgagcgcgcgccccgtcgccgccaggacagtgacgcgccgattcgccgtcgc
accagcgcctga
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