Halomonas aestuarii: BOX17_14165
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Entry
BOX17_14165 CDS
T04554
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hsi
Halomonas aestuarii
Pathway
hsi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BOX17_14165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsi03019
]
BOX17_14165
03400 DNA repair and recombination proteins [BR:
hsi03400
]
BOX17_14165
Enzymes [BR:
hsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BOX17_14165
Messenger RNA biogenesis [BR:
hsi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BOX17_14165
DNA repair and recombination proteins [BR:
hsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BOX17_14165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
APE31995
UniProt:
A0A1J0VIZ0
LinkDB
All DBs
Position
complement(3082147..3084108)
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AA seq
653 aa
AA seq
DB search
MIQQTLKQVFGYDDFRPGQRPVIEAIVGGRSAAAIFPTGSGKSLCYQLPALHLPHLTLVI
SPLLALMQDQLAFLARRGIAAASLDSGQSREEASAVMEGVKRGDIRILMVSVERLKNERF
RAFIRRVPISLMVVDEAHCLSEWGHNFRPDYLKLPAYRREFAIPQVLLLTATATPRVIED
MRSRFDIAREDVTGTGFYRANLDLAVSPVRAADRPRRLVEWLRPRFEQGPPESTIVYVTL
QQTAERLAAYLATAGLPAVAYHAGLDGERRDAIQRDFMAGRTPCIVATIAFGMGIDKADI
RNVVHFDLPKSIENYSQEIGRAGRDGLPSRCLMLAGRDHLEVLENFVYGDTPERHGIRRV
VDELRAAGREWELMLNTLSRHSNIRPLPLKTLLVQLELRGIIAPRYSYFADYRFRLADDP
ETLVGRFEGERRAFVQAVLEASSRARTWYTLDFAALDALGAERGLDTRRTRVITALEYFV
EKGWMTLESKQMTEVYEVLAPDPDPAALTDDLFSYFRDKERAEIERLQAMLALFESDDCL
SRRLADWFGDARAPERCGHCSACRGQVAHLPPSPPTAPLSTQDIDALCAPLLQRLAEAGE
GHPATPDLVTRFLCGITTPLFTPLKARRLPGFAALEGYAYGEVRERVAERLAA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgatccagcagacgctaaaacaggtcttcggctatgacgacttccggccgggccagcgc
ccggtcatcgaggccatcgtgggcggccgctcggcggcggccatcttccccaccggctcc
ggcaagtcgctctgctaccagctgccggccctgcacctgccccacctgaccctggtgatc
tccccgctgctggccctgatgcaggatcagctggccttcctggcacgccgcggcatcgcc
gccgccagcctcgattccggacagagccgcgaggaggcgtccgcggtgatggaaggcgtc
aagcgaggcgacatccgcatcctgatggtctccgtggagcgcctcaagaacgagcgattc
cgcgccttcatccgccgcgtgccaatctcgctgatggtggtcgacgaggcccactgcctc
tccgagtgggggcacaacttccggccggactacctcaagctgcccgcctaccgtcgagag
ttcgccattccgcaggtcctgctgctcaccgccacggccacgccgagggtcatcgaggac
atgcgcagccgcttcgacatcgctcgtgaggatgtcaccggcaccggcttctatcgcgcc
aacctcgacctggcagtatcgccggtacgggccgccgatcgcccgcgccgactggtcgag
tggctgcggccgcggttcgagcagggcccgccggagtccaccatcgtctacgtcaccctg
cagcagacggccgagcgcctggctgcctacctggcgaccgccggcctgccggcggtcgcc
taccacgccgggctggacggcgaacgacgcgacgcgatccagcgagacttcatggcgggc
cgcaccccctgcatcgtggccaccatcgccttcggcatgggcatcgacaaggccgatatc
cgcaacgtggtgcacttcgacctgccgaagtccatcgagaactacagccaggagatcggg
cgtgccggccgggacggcctgccctcacgctgcctgatgctggcaggccgcgaccatctc
gaggtgctggagaacttcgtctacggcgatacgccggagcggcacggcatccgccgggtg
gtcgacgagctgcgtgccgccgggcgcgagtgggagctgatgctcaacaccctgtcccgg
cacagcaacatccgccccctgccgctcaagaccctgctcgtgcagctcgagcttcgcggc
atcatcgcgcctcgctacagctacttcgccgactaccggttccggctggcggacgacccc
gagacgctggtgggacgcttcgagggcgagcgccgcgccttcgtccaggcggtgctcgag
gcctcgagccgtgcccgcacctggtacacgctggacttcgccgccctggacgccctgggc
gcagagcgcggcctcgacacccgacgcacgcgcgtcatcaccgccctggagtacttcgtc
gagaagggctggatgaccctggagagcaagcagatgaccgaggtctacgaggtgctcgca
cccgaccccgaccccgcggcgctgaccgatgacctctttagctacttccgcgacaaggag
cgcgccgagatcgagcgcctgcaggccatgctcgcgctcttcgagagcgacgactgcctc
agccggcgactggccgactggttcggtgatgcccgtgcccccgagcgctgcggacactgc
tcggcctgtcgtggccaggtggcccacctgccgccctccccgccgaccgcccccctgtcg
acccaggatatcgacgccctgtgcgcccccctcctgcaacgcctcgccgaggccggcgag
ggccaccccgccacgccggacctggtgacgcgtttcctgtgcgggatcaccacgccgctc
ttcacgcccctgaaggcacgccggctaccgggcttcgccgccctggaggggtacgcctat
ggcgaggtgcgcgagcgggtcgccgagcgcctggccgcctga
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